Information for 6-NVAGAGGCCCKGC (Motif 9)

T C A G T C G A C T G A T C A G C T G A C T A G A T C G G A T C T G A C A G T C A C G T C T A G T A G C
Reverse Opposite:
A T C G G A T C T G C A T C A G A C T G C T A G T A G C G A T C G A C T A G T C G A C T A G C T A G T C
p-value:1e-11
log p-value:-2.561e+01
Information Content per bp:1.476
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif45.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets45.8 +/- 27.3bp
Average Position of motif in Background51.4 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:NVAGAGGCCCKGC----
---CAGGCCNNGGCCNN
 T C A G T C G A C T G A T C A G C T G A C T A G A T C G G A T C T G A C A G T C A C G T C T A G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.70
Offset:4
Orientation:forward strand
Alignment:NVAGAGGCCCKGC
----AGGCCTNG-
 T C A G T C G A C T G A T C A G C T G A C T A G A T C G G A T C T G A C A G T C A C G T C T A G T A G C
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:NVAGAGGCCCKGC
----AGGCCTAG-
 T C A G T C G A C T G A T C A G C T G A C T A G A T C G G A T C T G A C A G T C A C G T C T A G T A G C
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:NVAGAGGCCCKGC
---GAGSCCGAGC
 T C A G T C G A C T G A T C A G C T G A C T A G A T C G G A T C T G A C A G T C A C G T C T A G T A G C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:NVAGAGGCCCKGC-
--GGGGGCGGGGCC
 T C A G T C G A C T G A T C A G C T G A C T A G A T C G G A T C T G A C A G T C A C G T C T A G T A G C A C G T
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:NVAGAGGCCCKGC-
----TGACCTTGAN
 T C A G T C G A C T G A T C A G C T G A C T A G A T C G G A T C T G A C A G T C A C G T C T A G T A G C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--NVAGAGGCCCKGC
GGGNGGGGGCGGGGC
 A C G T A C G T T C A G T C G A C T G A T C A G C T G A C T A G A T C G G A T C T G A C A G T C A C G T C T A G T A G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:NVAGAGGCCCKGC--
-AGGGGGCGGGGCTG
 T C A G T C G A C T G A T C A G C T G A C T A G A T C G G A T C T G A C A G T C A C G T C T A G T A G C A C G T A C G T
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:NVAGAGGCCCKGC---
-CAAAGGCGTGGCCAG
 T C A G T C G A C T G A T C A G C T G A C T A G A T C G G A T C T G A C A G T C A C G T C T A G T A G C A C G T A C G T A C G T
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:NVAGAGGCCCKGC---
--ACATGCCCGGGCAT
 T C A G T C G A C T G A T C A G C T G A C T A G A T C G G A T C T G A C A G T C A C G T C T A G T A G C A C G T A C G T A C G T
A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T