Information for 5-ACTGTAAAGAAAG (Motif 6)

C T G A G T A C C A G T A C T G A G C T C G T A C T G A C G T A T C A G T C G A G T C A C G T A C A T G
Reverse Opposite:
G T A C C G A T A C G T A C G T A G T C A C G T G A C T G A C T T C G A T G A C G T C A C A T G A G C T
p-value:1e-12
log p-value:-2.798e+01
Information Content per bp:1.680
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.08%
Number of Background Sequences with motif246.4
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets46.6 +/- 28.2bp
Average Position of motif in Background51.6 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACTGTAAAGAAAG
CAAAAGTAAACAAAG
 A C G T A C G T C T G A G T A C C A G T A C T G A G C T C G T A C T G A C G T A T C A G T C G A G T C A C G T A C A T G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0019.1_Foxl1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACTGTAAAGAAAG--
TAAATGTAAACAAAGGT
 A C G T A C G T C T G A G T A C C A G T A C T G A G C T C G T A C T G A C G T A T C A G T C G A G T C A C G T A C A T G A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACTGTAAAGAAAG
TACTGGAAAAAAAA
 A C G T C T G A G T A C C A G T A C T G A G C T C G T A C T G A C G T A T C A G T C G A G T C A C G T A C A T G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

Foxk1/MA0852.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACTGTAAAGAAAG--
AAAATGTAAACAAACAG
 A C G T A C G T C T G A G T A C C A G T A C T G A G C T C G T A C T G A C G T A T C A G T C G A G T C A C G T A C A T G A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACTGTAAAGAAAG--
AAAATGTAAACAAACAG
 A C G T A C G T C T G A G T A C C A G T A C T G A G C T C G T A C T G A C G T A T C A G T C G A G T C A C G T A C A T G A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACTGTAAAGAAAG-----
-AGAAGAACAAAGGACTA
 C T G A G T A C C A G T A C T G A G C T C G T A C T G A C G T A T C A G T C G A G T C A C G T A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACTGTAAAGAAAG--
AAAAAGTAAACAAAGAC
 A C G T A C G T C T G A G T A C C A G T A C T G A G C T C G T A C T G A C G T A T C A G T C G A G T C A C G T A C A T G A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACTGTAAAGAAAG--
AAAAAGTAAACAAACAC
 A C G T A C G T C T G A G T A C C A G T A C T G A G C T C G T A C T G A C G T A T C A G T C G A G T C A C G T A C A T G A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACTGTAAAGAAAG--
AAAAAGTAAACAAACAC
 A C G T A C G T C T G A G T A C C A G T A C T G A G C T C G T A C T G A C G T A T C A G T C G A G T C A C G T A C A T G A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ACTGTAAAGAAAG-
----AAAACAAAGG
 C T G A G T A C C A G T A C T G A G C T C G T A C T G A C G T A T C A G T C G A G T C A C G T A C A T G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G