Information for 4-CACAATGCCT (Motif 4)

G T A C C G T A T A G C C G T A G C T A C A G T A T C G T G A C T G A C A C G T
Reverse Opposite:
T G C A A C T G A C T G A T G C G T C A C G A T C G A T A T C G C G A T C A T G
p-value:1e-13
log p-value:-3.097e+01
Information Content per bp:1.725
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif377.2
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets49.3 +/- 26.3bp
Average Position of motif in Background48.5 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CACAATGCCT
-ACAAAG---
 G T A C C G T A T A G C C G T A G C T A C A G T A T C G T G A C T G A C A C G T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CACAATGCCT--
TACCCACAATGCATTG
 A C G T A C G T A C G T A C G T G T A C C G T A T A G C C G T A G C T A C A G T A T C G T G A C T G A C A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CACAATGCCT
VRRACAAWGG--
 A C G T A C G T G T A C C G T A T A G C C G T A G C T A C A G T A T C G T G A C T G A C A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CACAATGCCT
GACAATGNN-
 G T A C C G T A T A G C C G T A G C T A C A G T A T C G T G A C T G A C A C G T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CACAATGCCT-
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T G T A C C G T A T A G C C G T A G C T A C A G T A T C G T G A C T G A C A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CACAATGCCT---
-ACAAAGGNBCCT
 G T A C C G T A T A G C C G T A G C T A C A G T A T C G T G A C T G A C A C G T A C G T A C G T A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CACAATGCCT
VRAACAATGG--
 A C G T A C G T G T A C C G T A T A G C C G T A G C T A C A G T A T C G T G A C T G A C A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CACAATGCCT
RNAACAATGG--
 A C G T A C G T G T A C C G T A T A G C C G T A G C T A C A G T A T C G T G A C T G A C A C G T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACAATGCCT
RAACAATGGN-
 A C G T G T A C C G T A T A G C C G T A G C T A C A G T A T C G T G A C T G A C A C G T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CACAATGCCT
RACAAWGG--
 G T A C C G T A T A G C C G T A G C T A C A G T A T C G T G A C T G A C A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T