Information for 13-ACAGTGCAAACAT (Motif 18)

C T G A A G T C C G T A C T A G A C G T A C T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G A T C T A G A G C T
p-value:1e-8
log p-value:-1.910e+01
Information Content per bp:1.916
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 17.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---ACAGTGCAAACAT-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T C T G A A G T C C G T A C T A G A C G T A C T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACAGTGCAAACAT---
-CAAAGTAAACANNNN
 C T G A A G T C C G T A C T A G A C G T A C T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACAGTGCAAACAT
NCTAAGTAAACA-
 C T G A A G T C C G T A C T A G A C G T A C T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACAGTGCAAACAT--
NCWRWGTAAACANSV
 C T G A A G T C C G T A C T A G A C G T A C T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACAGTGCAAACAT
--AAAGTAAACA-
 C T G A A G T C C G T A C T A G A C G T A C T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACAGTGCAAACAT
--AAAGTAAACA-
 C T G A A G T C C G T A C T A G A C G T A C T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:ACAGTGCAAACAT--
---ATGTAAACADGS
 C T G A A G T C C G T A C T A G A C G T A C T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACAGTGCAAACAT-
--TATGTAAACANG
 C T G A A G T C C G T A C T A G A C G T A C T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACAGTGCAAACAT
--WAAGTAAAYA-
 C T G A A G T C C G T A C T A G A C G T A C T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:10
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ACAGTGCAAACAT
----DGTAAACA-
 C T G A A G T C C G T A C T A G A C G T A C T G A G T C C G T A C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A A C G T