Information for 10-GAGRGAGAGAGAG (Motif 16)

A T C G C T G A A C T G C T G A A C T G C T G A C T A G C T G A C T A G C G T A A C T G C G T A T C A G
Reverse Opposite:
A G T C C G A T G T A C A C G T A G T C G A C T A G T C G A C T G T A C A G C T G T A C A G C T A T G C
p-value:1e-8
log p-value:-2.044e+01
Information Content per bp:1.726
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif449.6
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets53.0 +/- 26.2bp
Average Position of motif in Background49.7 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGRGAGAGAGAG
GAAAGTGAAAGT-
 A T C G C T G A A C T G C T G A A C T G C T G A C T A G C T G A C T A G C G T A A C T G C G T A T C A G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGRGAGAGAGAG-
AGAAAGTGAAAGTGA
 A C G T A T C G C T G A A C T G C T G A A C T G C T G A C T A G C T G A C T A G C G T A A C T G C G T A T C A G A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGRGAGAGAGAG-
AGATGKDGAGATAAG
 A C G T A T C G C T G A A C T G C T G A A C T G C T G A C T A G C T G A C T A G C G T A A C T G C G T A T C A G A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAGRGAGAGAGAG----
--TTGACCGAGAATTCC
 A T C G C T G A A C T G C T G A A C T G C T G A C T A G C T G A C T A G C G T A A C T G C G T A T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAGRGAGAGAGAG--
NNNACCGAGAGTNNN
 A T C G C T G A A C T G C T G A A C T G C T G A C T A G C T G A C T A G C G T A A C T G C G T A T C A G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GAGRGAGAGAGAG
--GGGCGGGAAGG
 A T C G C T G A A C T G C T G A A C T G C T G A C T A G C T G A C T A G C G T A A C T G C G T A T C A G
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GAGRGAGAGAGAG-
--AGGTGHCAGACA
 A T C G C T G A A C T G C T G A A C T G C T G A C T A G C T G A C T A G C G T A A C T G C G T A T C A G A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GAGRGAGAGAGAG--
--AGGTGNCAGACAG
 A T C G C T G A A C T G C T G A A C T G C T G A C T A G C T G A C T A G C G T A A C T G C G T A T C A G A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GAGRGAGAGAGAG-
--GRAASTGAAAST
 A T C G C T G A A C T G C T G A A C T G C T G A C T A G C T G A C T A G C G T A A C T G C G T A T C A G A C G T
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GAGRGAGAGAGAG
GGGGGGGGGGGGGGA-
 A C G T A C G T A C G T A T C G C T G A A C T G C T G A A C T G C T G A C T A G C T G A C T A G C G T A A C T G C G T A T C A G
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A A C G T