Information for 8-GCCTCTCTTGAAT (Motif 14)

A C T G A G T C A G T C A G C T A G T C A C G T A G T C A C G T A C G T A C T G C G T A T C G A A C G T
Reverse Opposite:
C G T A A G C T A C G T G T A C C G T A C G T A A C T G C G T A A C T G C T G A C T A G A C T G A G T C
p-value:1e-9
log p-value:-2.124e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.6 +/- 17.5bp
Average Position of motif in Background70.4 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCTCTCTTGAAT--
-NNTNTCATGAATGT
 A C T G A G T C A G T C A G C T A G T C A C G T A G T C A C G T A C G T A C T G C G T A T C G A A C G T A C G T A C G T
A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCCTCTCTTGAAT-----
--NNNTATTGAATTGNNN
 A C T G A G T C A G T C A G C T A G T C A C G T A G T C A C G T A C G T A C T G C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCCTCTCTTGAAT------
--NTTNTATGAATGTGNNC
 A C T G A G T C A G T C A G C T A G T C A C G T A G T C A C G T A C G T A C T G C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCCTCTCTTGAAT
---CCACTTGAA-
 A C T G A G T C A G T C A G C T A G T C A C G T A G T C A C G T A C G T A C T G C G T A T C G A A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

Stat6/MA0520.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCCTCTCTTGAAT--
ANTTCTCAGGAANNN
 A C T G A G T C A G T C A G C T A G T C A C G T A G T C A C G T A C G T A C T G C G T A T C G A A C G T A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCCTCTCTTGAAT-
-----ATTTGAATT
 A C T G A G T C A G T C A G C T A G T C A C G T A G T C A C G T A C G T A C T G C G T A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCCTCTCTTGAAT
ANTTCTNNAGAA-
 A C T G A G T C A G T C A G C T A G T C A C G T A G T C A C G T A C G T A C T G C G T A T C G A A C G T
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCCTCTCTTGAAT
--TTCTNMGGAA-
 A C T G A G T C A G T C A G C T A G T C A C G T A G T C A C G T A C G T A C T G C G T A T C G A A C G T
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T

PAX1/MA0779.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCCTCTCTTGAAT---
CGTCACGCATGACTGCA
 A C G T A C T G A G T C A G T C A G C T A G T C A C G T A G T C A C G T A C G T A C T G C G T A T C G A A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCCTCTCTTGAAT
--ACCACTTGAA-
 A C T G A G T C A G T C A G C T A G T C A C G T A G T C A C G T A C G T A C T G C G T A T C G A A C G T
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T