Information for 9-CATAAAGGGT (Motif 13)

T A G C G C T A A C G T C T G A T C G A C G T A T A C G T C A G T A C G G A C T
Reverse Opposite:
C T G A A T G C A G T C A T G C C G A T A G C T A G C T T G C A C G A T A T C G
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.663
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.25%
Number of Background Sequences with motif828.6
Percentage of Background Sequences with motif1.77%
Average Position of motif in Targets46.6 +/- 28.0bp
Average Position of motif in Background50.1 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CATAAAGGGT
AACAAAGG--
 T A G C G C T A A C G T C T G A T C G A C G T A T A C G T C A G T A C G G A C T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATAAAGGGT
AAAACAAAGG--
 A C G T A C G T T A G C G C T A A C G T C T G A T C G A C G T A T A C G T C A G T A C G G A C T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CATAAAGGGT
GCTAAACGGT
 T A G C G C T A A C G T C T G A T C G A C G T A T A C G T C A G T A C G G A C T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CATAAAGGGT
RACAAWGG--
 T A G C G C T A A C G T C T G A T C G A C G T A T A C G T C A G T A C G G A C T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CATAAAGGGT
AAGCCATAAAA---
 A C G T A C G T A C G T A C G T T A G C G C T A A C G T C T G A T C G A C G T A T A C G T C A G T A C G G A C T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CATAAAGGGT-
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T T A G C G C T A A C G T C T G A T C G A C G T A T A C G T C A G T A C G G A C T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CATAAAGGGT
GCAATAAAA---
 A C G T A C G T T A G C G C T A A C G T C T G A T C G A C G T A T A C G T C A G T A C G G A C T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATAAAGGGT
NGYCATAAAWCH-
 A C G T A C G T A C G T T A G C G C T A A C G T C T G A T C G A C G T A T A C G T C A G T A C G G A C T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CATAAAGGGT
VRRACAAWGG--
 A C G T A C G T T A G C G C T A A C G T C T G A T C G A C G T A T A C G T C A G T A C G G A C T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATAAAGGGT---
-ACAAAGGNBCCT
 T A G C G C T A A C G T C T G A T C G A C G T A T A C G T C A G T A C G G A C T A C G T A C G T A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T