Information for 3-TGCCATCTTAAGTGKG (Motif 10)

A G C T A T C G A G T C A G T C G C T A A C G T A G T C A G C T G A C T C T G A C T G A C T A G C G A T A T C G C A G T C T A G
Reverse Opposite:
A G T C G T C A A T G C C G T A A G T C G A C T A G C T C G T A C T G A A C T G C G T A C A G T C T A G C T A G A T G C C T G A
p-value:1e-10
log p-value:-2.502e+01
Information Content per bp:1.729
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets32.1 +/- 22.6bp
Average Position of motif in Background54.2 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGCCATCTTAAGTGKG---
--NANTTTCAAGTGGTTAN
 A G C T A T C G A G T C A G T C G C T A A C G T A G T C A G C T G A C T C T G A C T G A C T A G C G A T A T C G C A G T C T A G A C G T A C G T A C G T
A C G T A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGCCATCTTAAGTGKG
------NTCAAGTGGN
 A G C T A T C G A G T C A G T C G C T A A C G T A G T C A G C T G A C T C T G A C T G A C T A G C G A T A T C G C A G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TGCCATCTTAAGTGKG
------BTBRAGTGSN
 A G C T A T C G A G T C A G T C G C T A A C G T A G T C A G C T G A C T C T G A C T G A C T A G C G A T A T C G C A G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TGCCATCTTAAGTGKG
------NTCAAGTGG-
 A G C T A T C G A G T C A G T C G C T A A C G T A G T C A G C T G A C T C T G A C T G A C T A G C G A T A T C G C A G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TGCCATCTTAAGTGKG
------CTYRAGTGSY
 A G C T A T C G A G T C A G T C G C T A A C G T A G T C A G C T G A C T C T G A C T G A C T A G C G A T A T C G C A G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGCCATCTTAAGTGKG
ATGCCAACC--------
 A C G T A G C T A T C G A G T C A G T C G C T A A C G T A G T C A G C T G A C T C T G A C T G A C T A G C G A T A T C G C A G T C T A G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGCCATCTTAAGTGKG----
---NTNNTTAAGTGGNTNAN
 A G C T A T C G A G T C A G T C G C T A A C G T A G T C A G C T G A C T C T G A C T G A C T A G C G A T A T C G C A G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TGCCATCTTAAGTGKG
-------TTAAGTGGN
 A G C T A T C G A G T C A G T C G C T A A C G T A G T C A G C T G A C T C T G A C T G A C T A G C G A T A T C G C A G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGCCATCTTAAGTGKG
GCNGCCATCTTG------
 A C G T A C G T A G C T A T C G A G T C A G T C G C T A A C G T A G T C A G C T G A C T C T G A C T G A C T A G C G A T A T C G C A G T C T A G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TGCCATCTTAAGTGKG
-------TTAAGTGGT
 A G C T A T C G A G T C A G T C G C T A A C G T A G T C A G C T G A C T C T G A C T G A C T A G C G A T A T C G C A G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T