Information for 1-GACTACAATTCCC (Motif 1)

C T A G C G T A T A G C A C G T G T C A A G T C C G T A C G T A G A C T C G A T G T A C A G T C G T A C
Reverse Opposite:
A C T G T A C G A C T G G C T A C T G A G C A T G C A T A C T G C A G T C G T A A C T G A C G T A G T C
p-value:1e-28
log p-value:-6.582e+01
Information Content per bp:1.765
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.91%
Number of Background Sequences with motif218.4
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets49.7 +/- 29.0bp
Average Position of motif in Background48.6 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:1
Orientation:forward strand
Alignment:GACTACAATTCCC
-ACTACAATTCCC
 C T A G C G T A T A G C A C G T G T C A A G T C C G T A C G T A G A C T C G A T G T A C A G T C G T A C
A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GACTACAATTCCC-------
RACTACAACTCCCAGVAKGC
 C T A G C G T A T A G C A C G T G T C A A G T C C G T A C G T A G A C T C G A T G T A C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GACTACAATTCCC-------
AACTACAATTCCCAGAATGC
 C T A G C G T A T A G C A C G T G T C A A G T C C G T A C G T A G A C T C G A T G T A C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GACTACAATTCCC
NWAACCACADNN---
 A C G T A C G T C T A G C G T A T A G C A C G T G T C A A G T C C G T A C G T A G A C T C G A T G T A C A G T C G T A C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACTACAATTCCC
NAAACCACAG-----
 A C G T A C G T C T A G C G T A T A G C A C G T G T C A A G T C C G T A C G T A G A C T C G A T G T A C A G T C G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GACTACAATTCCC
ATTTACGACAAATAGC
 A C G T A C G T A C G T C T A G C G T A T A G C A C G T G T C A A G T C C G T A C G T A G A C T C G A T G T A C A G T C G T A C
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GACTACAATTCCC
AAACCACAGC----
 A C G T C T A G C G T A T A G C A C G T G T C A A G T C C G T A C G T A G A C T C G A T G T A C A G T C G T A C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GACTACAATTCCC----
-----CACTTCCYCTTT
 C T A G C G T A T A G C A C G T G T C A A G T C C G T A C G T A G A C T C G A T G T A C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GACTACAATTCCC
AAACCACANN----
 A C G T C T A G C G T A T A G C A C G T G T C A A G T C C G T A C G T A G A C T C G A T G T A C A G T C G T A C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GACTACAATTCCC
---TKCTGTTCCA
 C T A G C G T A T A G C A C G T G T C A A G T C C G T A C G T A G A C T C G A T G T A C A G T C G T A C
A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A