Information for 2-TGMCCTTTGCCCTTGS (Motif 3)

A C G T A C T G T G C A G T A C G T A C A C G T A C G T A C G T C A T G A G T C T G A C A G T C A C G T A C G T A C T G A T G C
Reverse Opposite:
A T C G G T A C C G T A C G T A A C T G A C T G T C A G G A T C C G T A G T C A C G T A A C T G A C T G A C G T A G T C C G T A
p-value:1e-21
log p-value:-4.866e+01
Information Content per bp:1.790
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.4 +/- 17.8bp
Average Position of motif in Background48.7 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGMCCTTTGCCCTTGS
TGGACTTTGNNCTCN-
 A C G T A C T G T G C A G T A C G T A C A C G T A C G T A C G T C A T G A G T C T G A C A G T C A C G T A C G T A C T G A T G C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGMCCTTTGCCCTTGS
TGGACTTTGNNCTNTG
 A C G T A C T G T G C A G T A C G T A C A C G T A C G T A C G T C A T G A G T C T G A C A G T C A C G T A C G T A C T G A T G C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TGMCCTTTGCCCTTGS
TGACCTTTGCCCTA--
 A C G T A C T G T G C A G T A C G T A C A C G T A C G T A C G T C A T G A G T C T G A C A G T C A C G T A C G T A C T G A T G C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TGMCCTTTGCCCTTGS
GTTGACCTTTGACCTTT-
 A C G T A C G T A C G T A C T G T G C A G T A C G T A C A C G T A C G T A C G T C A T G A G T C T G A C A G T C A C G T A C G T A C T G A T G C
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGMCCTTTGCCCTTGS
TGACCTTTGCCCTAN-
 A C G T A C T G T G C A G T A C G T A C A C G T A C G T A C G T C A T G A G T C T G A C A G T C A C G T A C G T A C T G A T G C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGMCCTTTGCCCTTGS
TGACCTTTGACCTC--
 A C G T A C T G T G C A G T A C G T A C A C G T A C G T A C G T C A T G A G T C T G A C A G T C A C G T A C G T A C T G A T G C
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:7
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGMCCTTTGCCCTTGS
TGACCTTTGACCTN--
 A C G T A C T G T G C A G T A C G T A C A C G T A C G T A C G T C A T G A G T C T G A C A G T C A C G T A C G T A C T G A T G C
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TGMCCTTTGCCCTTGS
TGACCTTTGCCCCA--
 A C G T A C T G T G C A G T A C G T A C A C G T A C G T A C G T C A T G A G T C T G A C A G T C A C G T A C G T A C T G A T G C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGMCCTTTGCCCTTGS
TGACCTTTGACCCC--
 A C G T A C T G T G C A G T A C G T A C A C G T A C G T A C G T C A T G A G T C T G A C A G T C A C G T A C G T A C T G A T G C
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGMCCTTTGCCCTTGS
TGACCTTTGACCCC--
 A C G T A C T G T G C A G T A C G T A C A C G T A C G T A C G T C A T G A G T C T G A C A G T C A C G T A C G T A C T G A T G C
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T