Information for 16-GCCCAGCCAA (Motif 17)

A T C G A T G C A T G C T G A C C G T A A T C G G T A C A G T C G T C A C T G A
Reverse Opposite:
A G C T A C G T A C T G A C T G A T G C C G A T A C T G T A C G A T C G T A G C
p-value:1e-10
log p-value:-2.332e+01
Information Content per bp:1.828
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.08%
Number of Background Sequences with motif301.0
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets45.5 +/- 25.3bp
Average Position of motif in Background48.1 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGCCAA
TGCCCAGNHW-
 A C G T A T C G A T G C A T G C T G A C C G T A A T C G G T A C A G T C G T C A C T G A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCCCAGCCAA-----
TCCCAGMCRAGCCCC
 A T C G A T G C A T G C T G A C C G T A A T C G G T A C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GCCCAGCCAA
--BCAGACWA
 A T C G A T G C A T G C T G A C C G T A A T C G G T A C A G T C G T C A C T G A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0167.1_Sox13_2/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GCCCAGCCAA---
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T A T C G A T G C A T G C T G A C C G T A A T C G G T A C A G T C G T C A C T G A A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GCCCAGCCAA
----TGCCAA
 A T C G A T G C A T G C T G A C C G T A A T C G G T A C A G T C G T C A C T G A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCCCAGCCAA-
--CGTGCCAAG
 A T C G A T G C A T G C T G A C C G T A A T C G G T A C A G T C G T C A C T G A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCCAGCCAA----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A T C G A T G C A T G C T G A C C G T A A T C G G T A C A G T C G T C A C T G A A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCCAGCCAA-
GGCCCCGCCCCC
 A C G T A T C G A T G C A T G C T G A C C G T A A T C G G T A C A G T C G T C A C T G A A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

EGR4/MA0733.1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCCCAGCCAA--
TTACGCCCACGCATTT
 A C G T A C G T A C G T A C G T A T C G A T G C A T G C T G A C C G T A A T C G G T A C A G T C G T C A C T G A A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCCAGCCAA---
-ACTAGCCAATCA
 A T C G A T G C A T G C T G A C C G T A A T C G G T A C A G T C G T C A C T G A A C G T A C G T A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A