Information for 10-TTTATAGGGT (Motif 12)

A C G T A C G T A G C T G T C A G C A T C T G A C T A G C T A G C A T G C G A T
Reverse Opposite:
G C T A G T A C G A T C A G T C A G C T C G T A C A G T T C G A C G T A C G T A
p-value:1e-11
log p-value:-2.615e+01
Information Content per bp:1.772
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif201.5
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets43.2 +/- 28.1bp
Average Position of motif in Background53.4 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TTTATAGGGT
TTTTATKRGG-
 A C G T A C G T A C G T A G C T G T C A G C A T C T G A C T A G C T A G C A T G C G A T
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.77
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATAGGGT
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A G C A T C T G A C T A G C T A G C A T G C G A T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.77
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATAGGGT
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A G C A T C T G A C T A G C T A G C A T G C G A T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TTTATAGGGT
NTTTTATTGG--
 A C G T A C G T A C G T A C G T A G C T G T C A G C A T C T G A C T A G C T A G C A T G C G A T
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TTTATAGGGT
TTTTTATTGG--
 A C G T A C G T A C G T A C G T A G C T G T C A G C A T C T G A C T A G C T A G C A T G C G A T
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATAGGGT-
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A G C A T C T G A C T A G C T A G C A T G C G A T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TTTATAGGGT
DGWTTTATGRCN-
 A C G T A C G T A C G T A C G T A C G T A G C T G T C A G C A T C T G A C T A G C T A G C A T G C G A T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATAGGGT-
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A G C A T C T G A C T A G C T A G C A T G C G A T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTTATAGGGT
NTTTTATTGG--
 A C G T A C G T A C G T A C G T A G C T G T C A G C A T C T G A C T A G C T A G C A T G C G A T
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTTATAGGGT
TTTTATTRGN-
 A C G T A C G T A C G T A G C T G T C A G C A T C T G A C T A G C T A G C A T G C G A T
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T