Information for 10-GGCAGBVAGCTCTATG (Motif 13)

A T C G A C T G G T A C C G T A A T C G A C G T T C G A C G T A A C T G A T G C A C G T A T G C C G A T C T G A A C G T A C T G
Reverse Opposite:
A G T C G T C A G A C T C G T A A T C G C G T A A T C G A G T C A C G T A C G T T C G A T A G C A C G T A C T G A G T C A T G C
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.792
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 18.3bp
Average Position of motif in Background49.7 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGCAGBVAGCTCTATG---
-------GGCTCYAKCAYC
 A T C G A C T G G T A C C G T A A T C G A C G T T C G A C G T A A C T G A T G C A C G T A T G C C G A T C T G A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GGCAGBVAGCTCTATG
-------NGCTN----
 A T C G A C T G G T A C C G T A A T C G A C G T T C G A C G T A A C T G A T G C A C G T A T G C C G A T C T G A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGCAGBVAGCTCTATG--
-NNNNTGAGCACTGTNNG
 A T C G A C T G G T A C C G T A A T C G A C G T T C G A C G T A A C T G A T G C A C G T A T G C C G A T C T G A A C G T A C T G A C G T A C G T
A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGBVAGCTCTATG
AGGGAAGTCATTTCT---
 A C G T A C G T A T C G A C T G G T A C C G T A A T C G A C G T T C G A C G T A A C T G A T G C A C G T A T G C C G A T C T G A A C G T A C T G
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GGCAGBVAGCTCTATG---
-------AGGTCAAGGTCA
 A T C G A C T G G T A C C G T A A T C G A C G T T C G A C G T A A C T G A T G C A C G T A T G C C G A T C T G A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.49
Offset:7
Orientation:forward strand
Alignment:GGCAGBVAGCTCTATG---
-------AGGTCAAGGTCA
 A T C G A C T G G T A C C G T A A T C G A C G T T C G A C G T A A C T G A T G C A C G T A T G C C G A T C T G A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.48
Offset:8
Orientation:forward strand
Alignment:GGCAGBVAGCTCTATG
--------GCTCCG--
 A T C G A C T G G T A C C G T A A T C G A C G T T C G A C G T A A C T G A T G C A C G T A T G C C G A T C T G A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:8
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----GGCAGBVAGCTCTATG
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C G T A T C G A C T G G T A C C G T A A T C G A C G T T C G A C G T A A C T G A T G C A C G T A T G C C G A T C T G A A C G T A C T G
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.47
Offset:5
Orientation:forward strand
Alignment:GGCAGBVAGCTCTATG
-----CAAGCTT----
 A T C G A C T G G T A C C G T A A T C G A C G T T C G A C G T A A C T G A T G C A C G T A T G C C G A T C T G A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.47
Offset:3
Orientation:forward strand
Alignment:GGCAGBVAGCTCTATG
---NAHCAGCTGD---
 A T C G A C T G G T A C C G T A A T C G A C G T T C G A C G T A A C T G A T G C A C G T A T G C C G A T C T G A A C G T A C T G
A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T