Information for 9-YTCCCCACAGACAGWA (Motif 11)

A G C T A C G T G T A C G T A C A G T C A G T C C G T A G T A C C G T A A T C G C G T A T A G C C G T A A C T G C G T A G T C A
Reverse Opposite:
A C G T C G A T A G T C A C G T A C T G A C G T A T G C A C G T A C T G A C G T A C T G A C T G A C T G A C T G C G T A T C A G
p-value:1e-10
log p-value:-2.412e+01
Information Content per bp:1.769
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.4 +/- 21.7bp
Average Position of motif in Background56.1 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:YTCCCCACAGACAGWA--
--AAACAGACAAAGGAAT
 A G C T A C G T G T A C G T A C A G T C A G T C C G T A G T A C C G T A A T C G C G T A T A G C C G T A A C T G C G T A G T C A A C G T A C G T
A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YTCCCCACAGACAGWA
-AAACCACAGAN----
 A G C T A C G T G T A C G T A C A G T C A G T C C G T A G T A C C G T A A T C G C G T A T A G C C G T A A C T G C G T A G T C A
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YTCCCCACAGACAGWA
-AAACCACAGC-----
 A G C T A C G T G T A C G T A C A G T C A G T C C G T A G T A C C G T A A T C G C G T A T A G C C G T A A C T G C G T A G T C A
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YTCCCCACAGACAGWA
NWAACCACADNN----
 A G C T A C G T G T A C G T A C A G T C A G T C C G T A G T A C C G T A A T C G C G T A T A G C C G T A A C T G C G T A G T C A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:YTCCCCACAGACAGWA
------CCAGACAG--
 A G C T A C G T G T A C G T A C A G T C A G T C C G T A G T A C C G T A A T C G C G T A T A G C C G T A A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:YTCCCCACAGACAGWA
NAAACCACAG------
 A G C T A C G T G T A C G T A C A G T C A G T C C G T A G T A C C G T A A T C G C G T A T A G C C G T A A C T G C G T A G T C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:YTCCCCACAGACAGWA
------CCAGACRSVB
 A G C T A C G T G T A C G T A C A G T C A G T C C G T A G T A C C G T A A T C G C G T A T A G C C G T A A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:YTCCCCACAGACAGWA
--------ACAAAG--
 A G C T A C G T G T A C G T A C A G T C A G T C C G T A G T A C C G T A A T C G C G T A T A G C C G T A A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:YTCCCCACAGACAGWA
----CCATATATGG--
 A G C T A C G T G T A C G T A C A G T C A G T C C G T A G T A C C G T A A T C G C G T A T A G C C G T A A C T G C G T A G T C A
A C G T A C G T A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:YTCCCCACAGACAGWA
---------CACAGN-
 A G C T A C G T G T A C G T A C A G T C A G T C C G T A G T A C C G T A A T C G C G T A T A G C C G T A A C T G C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T