Information for 2-ATTTACACTTVAG (Motif 10)

C T G A A C G T A C G T C G A T G C T A G T A C C G T A A G T C A C G T A C G T T A G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A G T C A A C T G A C G T A C T G C A G T C G T A C G T A C G T A A G C T
p-value:1e-10
log p-value:-2.504e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.6 +/- 24.6bp
Average Position of motif in Background33.2 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATTTACACTTVAG
ATTAACACCT---
 C T G A A C G T A C G T C G A T G C T A G T A C C G T A A G T C A C G T A C G T T A G C C G T A A C T G
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATTTACACTTVAG
KTTCACACCT---
 C T G A A C G T A C G T C G A T G C T A G T A C C G T A A G T C A C G T A C G T T A G C C G T A A C T G
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATTTACACTTVAG
TTTCACACCT---
 C T G A A C G T A C G T C G A T G C T A G T A C C G T A A G T C A C G T A C G T T A G C C G T A A C T G
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTTACACTTVAG
TTTCACACCTN--
 C T G A A C G T A C G T C G A T G C T A G T A C C G T A A G T C A C G T A C G T T A G C C G T A A C T G
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATTTACACTTVAG
----CCACTTGAA
 C T G A A C G T A C G T C G A T G C T A G T A C C G T A A G T C A C G T A C G T T A G C C G T A A C T G
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Pax6/MA0069.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATTTACACTTVAG--
-TTCACGCATGAGTT
 C T G A A C G T A C G T C G A T G C T A G T A C C G T A A G T C A C G T A C G T T A G C C G T A A C T G A C G T A C G T
A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATTTACACTTVAG
-TTCACACCTT--
 C T G A A C G T A C G T C G A T G C T A G T A C C G T A A G T C A C G T A C G T T A G C C G T A A C T G
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATTTACACTTVAG
---ACCACTTGAA
 C T G A A C G T A C G T C G A T G C T A G T A C C G T A A G T C A C G T A C G T T A G C C G T A A C T G
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATTTACACTTVAG
-TTMACACCTT--
 C T G A A C G T A C G T C G A T G C T A G T A C C G T A A G T C A C G T A C G T T A G C C G T A A C T G
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATTTACACTTVAG
--TCACACCT---
 C T G A A C G T A C G T C G A T G C T A G T A C C G T A A G T C A C G T A C G T T A G C C G T A A C T G
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T