Information for 24-CGAACCTGACCGT (Motif 49)

A G T C A C T G C G T A G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T
Reverse Opposite:
G T C A G T A C A C T G A C T G A C G T A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G
p-value:1e-4
log p-value:-9.228e+00
Information Content per bp:1.940
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.5 +/- 5.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGAACCTGACCGT
TGACCTTGACCT-
 A G T C A C T G C G T A G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CGAACCTGACCGT--
-----NTGACCTTGA
 A G T C A C T G C G T A G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CGAACCTGACCGT--
-----CTGACCTTTG
 A G T C A C T G C G T A G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CGAACCTGACCGT
------TGACCT-
 A G T C A C T G C G T A G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGAACCTGACCGT
TGACCTTGACCT-
 A G T C A C T G C G T A G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGAACCTGACCGT-----
--NNNNTGACCTTTNNNN
 A G T C A C T G C G T A G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CGAACCTGACCGT---
------TGACCTTGAT
 A G T C A C T G C G T A G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGAACCTGACCGT-----
--NNNGTGACCTTTGNNN
 A G T C A C T G C G T A G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CGAACCTGACCGT--
-----ATGACCTTGA
 A G T C A C T G C G T A G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CGAACCTGACCGT-
------TGACCYCT
 A G T C A C T G C G T A G T C A A G T C A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T