Information for 13-SRARAGSMGAKYGGWG (Motif 32)

A T C G C T A G C G T A C T A G C G T A A C T G T A C G G T C A C T A G C G T A A C G T A G T C A C T G A C T G C G A T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C C T A G G T C A A C G T A G T C A C G T A T G C A G T C A C G T A G T C A C G T G A T C A T G C
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.798
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 19.5bp
Average Position of motif in Background42.0 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.53
Offset:5
Orientation:forward strand
Alignment:SRARAGSMGAKYGGWG---
-----GGAGAAAGGTGCGA
 A T C G C T A G C G T A C T A G C G T A A C T G T A C G G T C A C T A G C G T A A C G T A G T C A C T G A C T G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:forward strand
Alignment:SRARAGSMGAKYGGWG--
AGAGTGCTGATTGGTCCA
 A T C G C T A G C G T A C T A G C G T A A C T G T A C G G T C A C T A G C G T A A C G T A G T C A C T G A C T G C G A T A C T G A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

POL001.1_MTE/Jaspar

Match Rank:3
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-SRARAGSMGAKYGGWG--
TTTCGAGCGGAACGGTCGC
 A C G T A T C G C T A G C G T A C T A G C G T A A C T G T A C G G T C A C T A G C G T A A C G T A G T C A C T G A C T G C G A T A C T G A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:SRARAGSMGAKYGGWG-----
------CTGATTGGTCNATTT
 A T C G C T A G C G T A C T A G C G T A A C T G T A C G G T C A C T A G C G T A A C G T A G T C A C T G A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.46
Offset:11
Orientation:reverse strand
Alignment:SRARAGSMGAKYGGWG-
-----------CGGAGC
 A T C G C T A G C G T A C T A G C G T A A C T G T A C G G T C A C T A G C G T A A C G T A G T C A C T G A C T G C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.45
Offset:5
Orientation:forward strand
Alignment:SRARAGSMGAKYGGWG-
-----RGKGGGCGGAGC
 A T C G C T A G C G T A C T A G C G T A A C T G T A C G G T C A C T A G C G T A A C G T A G T C A C T G A C T G C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.45
Offset:6
Orientation:reverse strand
Alignment:SRARAGSMGAKYGGWG-------
------NAGANTGGCGGGGNGNA
 A T C G C T A G C G T A C T A G C G T A A C T G T A C G G T C A C T A G C G T A A C G T A G T C A C T G A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.45
Offset:6
Orientation:forward strand
Alignment:SRARAGSMGAKYGGWG
------TTRAGTGSYK
 A T C G C T A G C G T A C T A G C G T A A C T G T A C G G T C A C T A G C G T A A C G T A G T C A C T G A C T G C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.45
Offset:-2
Orientation:reverse strand
Alignment:--SRARAGSMGAKYGGWG
ANGNAAAGGTCA------
 A C G T A C G T A T C G C T A G C G T A C T A G C G T A A C T G T A C G G T C A C T A G C G T A A C G T A G T C A C T G A C T G C G A T A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.45
Offset:3
Orientation:forward strand
Alignment:SRARAGSMGAKYGGWG
---AAGAGGATTAG--
 A T C G C T A G C G T A C T A G C G T A A C T G T A C G G T C A C T A G C G T A A C G T A G T C A C T G A C T G C G A T A C T G
A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T