Information for 18-GGCGAAGGTGTCC (Motif 23)

A C T G C T A G A T G C A C T G C G T A C T G A A C T G A C T G A C G T A C T G C G A T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C C G T A A G T C A G T C A G C T A C G T A G T C A T C G A G T C A G T C
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.900
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.8 +/- 21.6bp
Average Position of motif in Background43.3 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCGAAGGTGTCC-
AGGNCANNGTGACCT
 A C G T A C T G C T A G A T G C A C T G C G T A C T G A A C T G A C T G A C G T A C T G C G A T A G T C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCGAAGGTGTCC----
-GCGGAGGTGTCGCCTC
 A C T G C T A G A T G C A C T G C G T A C T G A A C T G A C T G A C G T A C T G C G A T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGCGAAGGTGTCC
-----AGGTGTCA
 A C T G C T A G A T G C A C T G C G T A C T G A A C T G A C T G A C G T A C T G C G A T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCGAAGGTGTCC--
GGTCANNGTGACCTN
 A C T G C T A G A T G C A C T G C G T A C T G A A C T G A C T G A C G T A C T G C G A T A G T C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCGAAGGTGTCC
-SDGCAGGTGCNS
 A C T G C T A G A T G C A C T G C G T A C T G A A C T G A C T G A C G T A C T G C G A T A G T C A G T C
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GGCGAAGGTGTCC--
-------GTGACCTT
 A C T G C T A G A T G C A C T G C G T A C T G A A C T G A C T G A C G T A C T G C G A T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GGCGAAGGTGTCC-
--------TGACCT
 A C T G C T A G A T G C A C T G C G T A C T G A A C T G A C T G A C G T A C T G C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCGAAGGTGTCC--
AAGGTCACGGTGACCTG
 A C G T A C G T A C T G C T A G A T G C A C T G C G T A C T G A A C T G A C T G A C G T A C T G C G A T A G T C A G T C A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCGAAGGTGTCC
--NNCAGGTGNN-
 A C T G C T A G A T G C A C T G C G T A C T G A A C T G A C T G A C G T A C T G C G A T A G T C A G T C
A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCGAAGGTGTCC-----
-TNNNNGGTGTCATNTNT
 A C T G C T A G A T G C A C T G C G T A C T G A A C T G A C T G A C G T A C T G C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T