Information for 9-CATTTATTACTCT (Motif 13)

A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G A T C G T A A G T C A G C T A G T C A C G T
Reverse Opposite:
C G T A C T A G C T G A A C T G A C G T C G T A C G T A C G A T G T C A C G T A C G T A A C G T A C T G
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.4 +/- 17.8bp
Average Position of motif in Background40.8 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CATTTATTACTCT-
WCATTTTGKCCTCYT
 A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G A T C G T A A G T C A G C T A G T C A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PH0062.1_Hoxb7/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CATTTATTACTCT
TNNCATTAATTANTNC
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G A T C G T A A G T C A G C T A G T C A C G T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

PH0013.1_Cdx2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATTTATTACTCT-
NAATTTTATTACCNNN
 A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G A T C G T A A G T C A G C T A G T C A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

HOXA10/MA0899.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CATTTATTACTCT
NTTTTATTACN--
 A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G A T C G T A A G T C A G C T A G T C A C G T
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CATTTATTACTCT
-TTTTATTGC---
 A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G A T C G T A A G T C A G C T A G T C A C G T
A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CATTTATTACTCT
NTTTTATGAC---
 A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G A T C G T A A G T C A G C T A G T C A C G T
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATTTATTACTCT-
GAAAATTAATTACTTCG
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G A T C G T A A G T C A G C T A G T C A C G T A C G T
C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

PH0012.1_Cdx1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CATTTATTACTCT-
NAATTTTATTACCTNN
 A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G A T C G T A A G T C A G C T A G T C A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CATTTATTACTCT
-TTTTATGGCTN-
 A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G A T C G T A A G T C A G C T A G T C A C G T
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CATTTATTACTCT-
GAAAATTAATTACTTTG
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G A T C G T A A G T C A G C T A G T C A C G T A C G T
C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G