Information for 8-AGAGACCATGTTA (Motif 12)

C G T A C T A G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G C T A G C T C G T A
Reverse Opposite:
A C G T C T G A C T G A A G T C G T C A A C G T A C T G A C T G C G A T A G T C A C G T A G T C A C G T
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 22.0bp
Average Position of motif in Background62.3 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGAGACCATGTTA
GGTTAGAGACCT-----
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G C T A G C T C G T A
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAGACCATGTTA----
AATATACATGTAAAACA
 C G T A C T A G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G C T A G C T C G T A A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAGACCATGTTA
-GCNGCCATCTTG
 C G T A C T A G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G C T A G C T C G T A
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGAGACCATGTTA
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G C T A G C T C G T A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAGACCATGTTA-
YDGHTACAWTGTADC
 A C G T C G T A C T A G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G C T A G C T C G T A A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAGACCATGTTA-
TWGHWACAWTGTWDC
 A C G T C G T A C T A G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G C T A G C T C G T A A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGAGACCATGTTA
---GACAATGNN-
 C G T A C T A G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G C T A G C T C G T A
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGAGACCATGTTA
-AAAACAATGG--
 C G T A C T A G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G C T A G C T C G T A
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AGAGACCATGTTA--
----GTCATGTGACC
 C G T A C T A G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G C T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGAGACCATGTTA
-GCGACCACACTG
 C G T A C T A G C G T A A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G C T A G C T C G T A
A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G