Information for 10-GGTGGCTTAC (Motif 18)

A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A G T C A G T C
p-value:1e-6
log p-value:-1.387e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 27.0bp
Average Position of motif in Background28.9 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTGGCTTAC-----
TCTTTGGCGTACCCTAA
 A C G T A C G T A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGTGGCTTAC
-NGGGATTA-
 A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTGGCTTAC
--NGGATTAN
 A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCTTAC-
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGTGGCTTAC
NNTGTGGTTT--
 A C G T A C G T A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGTGGCTTAC-
---GGATTAGC
 A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGTGGCTTAC
--GGGATTAA
 A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCTTAC
GGTTGGCAT--
 A C G T A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGTGGCTTAC-
--GGGATTANN
 A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGTGGCTTAC
-GTGGAT---
 A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T