p-value: | 1e-9 |
log p-value: | -2.286e+01 |
Information Content per bp: | 1.760 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.74% |
Number of Background Sequences with motif | 4.1 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 34.2 +/- 26.2bp |
Average Position of motif in Background | 65.1 +/- 3.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
POL012.1_TATA-Box/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | KKYTATGAAAACAGAG- --GTATAAAAGGCGGGG |
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TBP/MA0108.2/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | KKYTATGAAAACAGAG- --GTATAAAAGGCGGGG |
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TATA-Box(TBP)/Promoter/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | KKYTATGAAAACAGAG GNCTATAAAAGG---- |
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PH0056.1_Hoxa9/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --KKYTATGAAAACAGAG ACGGCCATAAAATTAAT- |
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Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | KKYTATGAAAACAGAG NGCAATTAAA------ |
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Arid3a/MA0151.1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | KKYTATGAAAACAGAG ----ATTAAA------ |
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HOXA10/MA0899.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | KKYTATGAAAACAGAG GGTAATAAAAA----- |
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FOXP1/MA0481.1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | KKYTATGAAAACAGAG -CAAAAGTAAACAAAG |
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HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | KKYTATGAAAACAGAG NCYAATAAAA------ |
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FOXC2/MA0846.1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | KKYTATGAAAACAGAG ---TAAGTAAACAAA- |
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