Information for 3-TAGTGATGAA (Motif 6)

G A C T C G T A T A C G C A G T A T C G T C G A A G C T C T A G T G C A C G T A
Reverse Opposite:
G C A T A C G T G A T C T C G A A G C T T A G C G T C A A T G C G C A T C T G A
p-value:1e-10
log p-value:-2.525e+01
Information Content per bp:1.655
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif7.54%
Number of Background Sequences with motif1354.4
Percentage of Background Sequences with motif2.79%
Average Position of motif in Targets48.8 +/- 23.6bp
Average Position of motif in Background50.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TAGTGATGAA--
--ATGATGCAAT
 G A C T C G T A T A C G C A G T A T C G T C G A A G C T C T A G T G C A C G T A A C G T A C G T
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TAGTGATGAA--
--MTGATGCAAT
 G A C T C G T A T A C G C A G T A T C G T C G A A G C T C T A G T G C A C G T A A C G T A C G T
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

PH0017.1_Cux1_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAGTGATGAA-----
TAATGATGATCACTA
 G A C T C G T A T A C G C A G T A T C G T C G A A G C T C T A G T G C A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TAGTGATGAA---
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T G A C T C G T A T A C G C A G T A T C G T C G A A G C T C T A G T G C A C G T A A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TAGTGATGAA---
-GGTGYTGACAGS
 G A C T C G T A T A C G C A G T A T C G T C G A A G C T C T A G T G C A C G T A A C G T A C G T A C G T
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TAGTGATGAA---
NNTNTCATGAATGT
 A C G T G A C T C G T A T A C G C A G T A T C G T C G A A G C T C T A G T G C A C G T A A C G T A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

MEOX2/MA0706.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAGTGATGAA-
-AGTAATTAAC
 G A C T C G T A T A C G C A G T A T C G T C G A A G C T C T A G T G C A C G T A A C G T
A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAGTGATGAA-----
TGTAGGGATTAATTGTC
 A C G T A C G T G A C T C G T A T A C G C A G T A T C G T C G A A G C T C T A G T G C A C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAGTGATGAA---
AAAWWTGCTGACWWD
 A C G T A C G T G A C T C G T A T A C G C A G T A T C G T C G A A G C T C T A G T G C A C G T A A C G T A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TAGTGATGAA----
--ATGATKGATGRC
 G A C T C G T A T A C G C A G T A T C G T C G A A G C T C T A G T G C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C