Information for 2-GTGGGCACCC (Motif 4)

C T A G A G C T A T C G C T A G A T C G A G T C C T G A G T A C A G T C A G T C
Reverse Opposite:
C T A G A C T G A C T G A G C T A C T G A T G C A G T C A T G C C T G A G A T C
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.816
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif92.0
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets44.2 +/- 24.7bp
Average Position of motif in Background45.0 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GTGGGCACCC--
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T C T A G A G C T A T C G C T A G A T C G A G T C C T G A G T A C A G T C A G T C A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGCACCC
NGTGGGCAT--
 A C G T C T A G A G C T A T C G C T A G A T C G A G T C C T G A G T A C A G T C A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GTGGGCACCC----
TTGGGGGCGCCCCTAG
 A C G T A C G T C T A G A G C T A T C G C T A G A T C G A G T C C T G A G T A C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTGGGCACCC
GTGGGCCCCA
 C T A G A G C T A T C G C T A G A T C G A G T C C T G A G T A C A G T C A G T C
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGCACCC
GGTTGGCAT--
 A C G T C T A G A G C T A T C G C T A G A T C G A G T C C T G A G T A C A G T C A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGCACCC
NNTTGGCANN-
 A C G T C T A G A G C T A T C G C T A G A T C G A G T C C T G A G T A C A G T C A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGCACCC------
NNNNGGTACCCCCCANN
 A C G T C T A G A G C T A T C G C T A G A T C G A G T C C T G A G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGGGCACCC
NTTGGCANN-
 C T A G A G C T A T C G C T A G A T C G A G T C C T G A G T A C A G T C A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GTGGGCACCC
GARTGGTCATCGCCC
 A C G T A C G T A C G T A C G T A C G T C T A G A G C T A T C G C T A G A T C G A G T C C T G A G T A C A G T C A G T C
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGCACCC
TNNGGGCAG--
 A C G T C T A G A G C T A T C G C T A G A T C G A G T C C T G A G T A C A G T C A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T