Information for 2-TGTGTCCTTTCTTGTT (Motif 3)

A C G T A T C G A C G T C A T G A G C T A G T C G A T C A C G T A C G T A C G T A G T C A C G T A G C T A T C G G C A T A G C T
Reverse Opposite:
C T G A C G T A T A G C C T G A C G T A C T A G C G T A G T C A C G T A C A T G T A C G T C G A G T A C C G T A A T G C C G T A
p-value:1e-11
log p-value:-2.607e+01
Information Content per bp:1.758
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.1 +/- 19.7bp
Average Position of motif in Background49.0 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTGTCCTTTCTTGTT----
NNTGTTCTTTTTTGTTTACT
 A C G T A T C G A C G T C A T G A G C T A G T C G A T C A C G T A C G T A C G T A G T C A C G T A G C T A T C G G C A T A G C T A C G T A C G T A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGTGTCCTTTCTTGTT--
-NNNTCCTTTGTTCTNNN
 A C G T A T C G A C G T C A T G A G C T A G T C G A T C A C G T A C G T A C G T A G T C A C G T A G C T A T C G G C A T A G C T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGTGTCCTTTCTTGTT--
-TNNTCCTTTGTTCTNNT
 A C G T A T C G A C G T C A T G A G C T A G T C G A T C A C G T A C G T A C G T A G T C A C G T A G C T A T C G G C A T A G C T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGTGTCCTTTCTTGTT
-----CCTTTGTTTT-
 A C G T A T C G A C G T C A T G A G C T A G T C G A T C A C G T A C G T A C G T A G T C A C G T A G C T A T C G G C A T A G C T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTCCTTTCTTGTT
CAGTTTCGNTTCTN---
 A C G T A C G T A T C G A C G T C A T G A G C T A G T C G A T C A C G T A C G T A C G T A G T C A C G T A G C T A T C G G C A T A G C T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGTGTCCTTTCTTGTT
-GTGACCTT-------
 A C G T A T C G A C G T C A T G A G C T A G T C G A T C A C G T A C G T A C G T A G T C A C G T A G C T A T C G G C A T A G C T
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGTGTCCTTTCTTGTT
ACTTTCGTTTCT----
 A C G T A T C G A C G T C A T G A G C T A G T C G A T C A C G T A C G T A C G T A G T C A C G T A G C T A T C G G C A T A G C T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGTGTCCTTTCTTGTT----
-----NTNTTGTTGTTTGTN
 A C G T A T C G A C G T C A T G A G C T A G T C G A T C A C G T A C G T A C G T A G T C A C G T A G C T A T C G G C A T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGTGTCCTTTCTTGTT
-----CCTTTGTT---
 A C G T A T C G A C G T C A T G A G C T A G T C G A T C A C G T A C G T A C G T A G T C A C G T A G C T A T C G G C A T A G C T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGTGTCCTTTCTTGTT
--TGACCTTTNCNT--
 A C G T A T C G A C G T C A T G A G C T A G T C G A T C A C G T A C G T A C G T A G T C A C G T A G C T A T C G G C A T A G C T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T