Information for 3-CCCAACTGTCCCCTTC (Motif 11)

A G T C A G T C A G T C G T C A C T G A A T G C A G C T C A T G A C G T G T A C A G T C A G T C A G T C A G C T A G C T G A T C
Reverse Opposite:
C T A G C T G A C T G A C T A G C T A G C T A G A C T G T G C A G T A C C T G A A T C G G A C T A C G T A C T G C T A G T C A G
p-value:1e-8
log p-value:-1.911e+01
Information Content per bp:1.714
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif33.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets42.8 +/- 27.6bp
Average Position of motif in Background54.4 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCCAACTGTCCCCTTC-
--TCACTTTCACTTTCN
 A G T C A G T C A G T C G T C A C T G A A T G C A G C T C A T G A C G T G T A C A G T C A G T C A G T C A G C T A G C T G A T C A C G T
A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCCAACTGTCCCCTTC---
--CAKCTGKYCYYTTYCCC
 A G T C A G T C A G T C G T C A C T G A A T G C A G C T C A T G A C G T G T A C A G T C A G T C A G T C A G C T A G C T G A T C A C G T A C G T A C G T
A C G T A C G T T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCAACTGTCCCCTTC
TGCAGCTGTCCCT---
 A G T C A G T C A G T C G T C A C T G A A T G C A G C T C A T G A C G T G T A C A G T C A G T C A G T C A G C T A G C T G A T C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCCAACTGTCCCCTTC
----ACTTTCACTTTC
 A G T C A G T C A G T C G T C A C T G A A T G C A G C T C A T G A C G T G T A C A G T C A G T C A G T C A G C T A G C T G A T C
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCAACTGTCCCCTTC
CGACCAACTGCCGTG---
 A C G T A C G T A G T C A G T C A G T C G T C A C T G A A T G C A G C T C A T G A C G T G T A C A G T C A G T C A G T C A G C T A G C T G A T C
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCCAACTGTCCCCTTC
-CCAACTGCCA-----
 A G T C A G T C A G T C G T C A C T G A A T G C A G C T C A T G A C G T G T A C A G T C A G T C A G T C A G C T A G C T G A T C
A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCAACTGTCCCCTTC
CGACCAACTGCCATGC--
 A C G T A C G T A G T C A G T C A G T C G T C A C T G A A T G C A G C T C A T G A C G T G T A C A G T C A G T C A G T C A G C T A G C T G A T C
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCAACTGTCCCCTTC
GCCATCTGTT------
 A G T C A G T C A G T C G T C A C T G A A T G C A G C T C A T G A C G T G T A C A G T C A G T C A G T C A G C T A G C T G A T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCCAACTGTCCCCTTC
NNGCAGCTGTC------
 A C G T A G T C A G T C A G T C G T C A C T G A A T G C A G C T C A T G A C G T G T A C A G T C A G T C A G T C A G C T A G C T G A T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCCAACTGTCCCCTTC
----ACTTTCACTTTC
 A G T C A G T C A G T C G T C A C T G A A T G C A G C T C A T G A C G T G T A C A G T C A G T C A G T C A G C T A G C T G A T C
A C G T A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C