Information for 8-GAWAMCYKTCATS (Motif 20)

A T C G C G T A C G A T G T C A G T C A A G T C A G C T C A T G A C G T A G T C C G T A A C G T A T G C
Reverse Opposite:
T A C G C G T A A C G T A C T G C G T A G T A C C T G A A C T G C A G T A C G T C G T A C G A T A T G C
p-value:1e-5
log p-value:-1.164e+01
Information Content per bp:1.840
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.8 +/- 29.0bp
Average Position of motif in Background60.1 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX1/MA0782.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GAWAMCYKTCATS
TGACACCTGTCA--
 A C G T A T C G C G T A C G A T G T C A G T C A A G T C A G C T C A T G A C G T A G T C C G T A A C G T A T G C
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GAWAMCYKTCATS
TGACACCTGTCA--
 A C G T A T C G C G T A C G A T G T C A G T C A A G T C A G C T C A T G A C G T A G T C C G T A A C G T A T G C
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GAWAMCYKTCATS
TGACAGCTGTCA--
 A C G T A T C G C G T A C G A T G T C A G T C A A G T C A G C T C A T G A C G T A G T C C G T A A C G T A T G C
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GAWAMCYKTCATS
TGACAGCTGTCA--
 A C G T A T C G C G T A C G A T G T C A G T C A A G T C A G C T C A T G A C G T A G T C C G T A A C G T A T G C
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.65
Offset:7
Orientation:reverse strand
Alignment:GAWAMCYKTCATS
-------GTCATN
 A T C G C G T A C G A T G T C A G T C A A G T C A G C T C A T G A C G T A G T C C G T A A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAWAMCYKTCATS--
AAAGACCTGTCAATCC
 A C G T A T C G C G T A C G A T G T C A G T C A A G T C A G C T C A T G A C G T A G T C C G T A A C G T A T G C A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PB0108.1_Atf1_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAWAMCYKTCATS-
NTTATTCGTCATNC
 A T C G C G T A C G A T G T C A G T C A A G T C A G C T C A T G A C G T A G T C C G T A A C G T A T G C A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAWAMCYKTCATS--
AACGAGCTGTCAATAC
 A C G T A T C G C G T A C G A T G T C A G T C A A G T C A G C T C A T G A C G T A G T C C G T A A C G T A T G C A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAWAMCYKTCATS--
AATTACCTGTCAATAC
 A C G T A T C G C G T A C G A T G T C A G T C A A G T C A G C T C A T G A C G T A G T C C G T A A C G T A T G C A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAWAMCYKTCATS
-CCAACTGCCA--
 A T C G C G T A C G A T G T C A G T C A A G T C A G C T C A T G A C G T A G T C C G T A A C G T A T G C
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T