Information for 5-CACCAAGTAA (Motif 19)

A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C T G A C G T A C T G
p-value:1e-5
log p-value:-1.243e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets72.2 +/- 22.5bp
Average Position of motif in Background54.6 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACCAAGTAA---
AAAAACCAATTAAGAA
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0108.1_Msx3/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CACCAAGTAA---
CAAAACCAATTAATTT
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0005.1_Barhl1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CACCAAGTAA---
AACAACCAATTAATTC
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

Hmx1/MA0896.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CACCAAGTAA-----
ACAAGCAATTAATGAAT
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CACCAAGTAA-----
ACAAGCAATTAATGAAT
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

MSX2/MA0708.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CACCAAGTAA
--CCAATTAA
 A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A C G T A
A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

Hmx3/MA0898.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACCAAGTAA-----
ACAAGCAATTAAAGAAT
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACCAAGTAA-----
ACAAGCAATTAAAGAAT
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

Hmx2/MA0897.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACCAAGTAA-----
ACAAGCAATTAAAGAAT
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACCAAGTAA-----
ACAAGCAATTAAAGAAT
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T