Information for 9-ACCATTTCATGGCCAC (Motif 17)

G T C A G A T C G T A C C G T A C G A T C G A T A C G T A G T C G C T A A C G T C A T G T C A G G T A C G T A C G C T A A G T C
Reverse Opposite:
C T A G C G A T C A T G C A T G A G T C G T A C T G C A C G A T C T A G G T C A G C T A G C T A G A C T C A T G C T A G C A G T
p-value:1e-7
log p-value:-1.637e+01
Information Content per bp:1.568
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif4.49%
Number of Background Sequences with motif674.8
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets48.7 +/- 23.7bp
Average Position of motif in Background49.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0056.1_Hoxa9/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACCATTTCATGGCCAC
ANTAATTTTATGGCCGN
 A C G T G T C A G A T C G T A C C G T A C G A T C G A T A C G T A G T C G C T A A C G T C A T G T C A G G T A C G T A C G C T A A G T C
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PH0013.1_Cdx2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACCATTTCATGGCCAC-
-NAATTTTATTACCNNN
 G T C A G A T C G T A C C G T A C G A T C G A T A C G T A G T C G C T A A C G T C A T G T C A G G T A C G T A C G C T A A G T C A C G T
A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACCATTTCATGGCCAC-
--AAGTTCAAGGTCAGC
 G T C A G A T C G T A C C G T A C G A T C G A T A C G T A G T C G C T A A C G T C A T G T C A G G T A C G T A C G C T A A G T C A C G T
A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PH0012.1_Cdx1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACCATTTCATGGCCAC-
-NAATTTTATTACCTNN
 G T C A G A T C G T A C C G T A C G A T C G A T A C G T A G T C G C T A A C G T C A T G T C A G G T A C G T A C G C T A A G T C A C G T
A C G T C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACCATTTCATGGCCAC
NGANTTTTATGGCTCN
 G T C A G A T C G T A C C G T A C G A T C G A T A C G T A G T C G C T A A C G T C A T G T C A G G T A C G T A C G C T A A G T C
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

Sox1/MA0870.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACCATTTCATGGCCAC
AACAATAACATTGTT--
 A C G T G T C A G A T C G T A C C G T A C G A T C G A T A C G T A G T C G C T A A C G T C A T G T C A G G T A C G T A C G C T A A G T C
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACCATTTCATGGCCAC
----TTTTATGGCTN-
 G T C A G A T C G T A C C G T A C G A T C G A T A C G T A G T C G C T A A C G T C A T G T C A G G T A C G T A C G C T A A G T C
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACCATTTCATGGCCAC
---NTTTTATGAC---
 G T C A G A T C G T A C C G T A C G A T C G A T A C G T A G T C G C T A A C G T C A T G T C A G G T A C G T A C G C T A A G T C
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACCATTTCATGGCCAC
---ATTTCCTGTN---
 G T C A G A T C G T A C C G T A C G A T C G A T A C G T A G T C G C T A A C G T C A T G T C A G G T A C G T A C G C T A A G T C
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ACCATTTCATGGCCAC
-----NTCAAGGTCA-
 G T C A G A T C G T A C C G T A C G A T C G A T A C G T A G T C G C T A A C G T C A T G T C A G G T A C G T A C G C T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T