Information for 1-YMWCASMTWTMAW (Motif 3)

G A C T G T C A C G T A A G T C C G T A A T C G G T A C A C G T G C T A C G A T G T C A C G T A C G A T
Reverse Opposite:
G C T A C G A T A C G T C G T A C G A T G T C A A C T G T A G C A C G T C T A G C G A T A C G T C T G A
p-value:1e-4
log p-value:-1.069e+01
Information Content per bp:1.746
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif240.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets57.7 +/- 14.4bp
Average Position of motif in Background46.8 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TGIF2/MA0797.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YMWCASMTWTMAW
TGACAGCTGTCA-
 G A C T G T C A C G T A A G T C C G T A A T C G G T A C A C G T G C T A C G A T G T C A C G T A C G A T
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YMWCASMTWTMAW
TGACACCTGTCA-
 G A C T G T C A C G T A A G T C C G T A A T C G G T A C A C G T G C T A C G A T G T C A C G T A C G A T
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YMWCASMTWTMAW
TGACACCTGTCA-
 G A C T G T C A C G T A A G T C C G T A A T C G G T A C A C G T G C T A C G A T G T C A C G T A C G A T
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:YMWCASMTWTMAW
TGACAGCTGTCA-
 G A C T G T C A C G T A A G T C C G T A A T C G G T A C A C G T G C T A C G A T G T C A C G T A C G A T
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T

PH0104.1_Meis2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YMWCASMTWTMAW---
AAAGACCTGTCAATAC
 G A C T G T C A C G T A A G T C C G T A A T C G G T A C A C G T G C T A C G A T G T C A C G T A C G A T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-YMWCASMTWTMAW
TTMACACCTT----
 A C G T G A C T G T C A C G T A A G T C C G T A A T C G G T A C A C G T G C T A C G A T G T C A C G T A C G A T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:YMWCASMTWTMAW---
AACGAGCTGTCAATAC
 G A C T G T C A C G T A A G T C C G T A A T C G G T A C A C G T G C T A C G A T G T C A C G T A C G A T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:YMWCASMTWTMAW
TCACACCT-----
 G A C T G T C A C G T A A G T C C G T A A T C G G T A C A C G T G C T A C G A T G T C A C G T A C G A T
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:YMWCASMTWTMAW
TGACACCT-----
 G A C T G T C A C G T A A G T C C G T A A T C G G T A C A C G T G C T A C G A T G T C A C G T A C G A T
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:YMWCASMTWTMAW---
AATTACCTGTCAATAC
 G A C T G T C A C G T A A G T C C G T A A T C G G T A C A C G T G C T A C G A T G T C A C G T A C G A T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C