Information for 5-GTGTGGTATC (Motif 20)

A C T G A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.664e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background42.6 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGTATC
NNHTGTGGTTWN
 A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTGTGGTATC
CTGTGGTTTN
 A C T G A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTGTGGTATC
GTCTGTGGTTT-
 A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGTATC
GCTGTGGTTT-
 A C G T A C T G A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGGTATC
NNTGTGGTTT-
 A C G T A C T G A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGTATC
CAGTGTGGTCGC
 A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A G T C
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGTATC------
AATGGGGTATCACGTTT
 A C G T A C T G A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGTATC------
GATGGGGTATCATTTTT
 A C G T A C T G A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGTATC------
AATAGGGTATCAATTAT
 A C G T A C T G A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGTATC------
AATAGGGTATCAATATT
 A C G T A C T G A C G T A C T G A C G T A C T G A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T