Information for 12-AAATTAACCCACACAT (Motif 19)

C G T A C G T A C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G A C G T A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0129.1_Otx1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAATTAACCCACACAT
NNNAATTAATCCCCNCN-
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AAATTAACCCACACAT
-----CRCCCACGCA-
 C G T A C G T A C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAATTAACCCACACAT---
--ANNTNCCCACCCANNAC
 C G T A C G T A C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

PH0124.1_Obox5_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAATTAACCCACACAT
NANANTTAATCCCNNNN-
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAATTAACCCACACAT
-----AAACCACANN-
 C G T A C G T A C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AAATTAACCCACACAT
-----AAACCACAGAN
 C G T A C G T A C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAATTAACCCACACAT
GANNATTAATCCCTNNN-
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A A C G T

Hoxd3/MA0912.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AAATTAACCCACACAT
ANGNTAATTANCNCAN----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T A C G T A C G T A C G T

PH0079.1_Hoxd3/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AAATTAACCCACACAT
ANGNTAATTANCNCAN----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T A C G T A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAATTAACCCACACAT
GCCAATTAAC--------
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A A G T C A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T