Information for 14-GGCACTAGCTGCT (Motif 23)

A C T G A C T G T A G C G T C A T A G C A G C T C T G A A T C G A T G C C A G T A T C G A T G C G A C T
Reverse Opposite:
C T G A T A C G T A G C G T C A A T C G T A G C G A C T T C G A A T C G C A G T A T C G T A G C T G A C
p-value:1e-7
log p-value:-1.764e+01
Information Content per bp:1.539
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.8 +/- 23.1bp
Average Position of motif in Background34.7 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGCACTAGCTGCT
ADGGYAGYAGCATCT
 A C G T A C G T A C T G A C T G T A G C G T C A T A G C A G C T C T G A A T C G A T G C C A G T A T C G A T G C G A C T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGCACTAGCTGCT
---AGCAGCTGCT
 A C T G A C T G T A G C G T C A T A G C A G C T C T G A A T C G A T G C C A G T A T C G A T G C G A C T
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCACTAGCTGCT----
CTCAGCAGCTGCTACTG
 A C T G A C T G T A G C G T C A T A G C A G C T C T G A A T C G A T G C C A G T A T C G A T G C G A C T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGCACTAGCTGCT
-NNAGCAGCTGCT
 A C T G A C T G T A G C G T C A T A G C A G C T C T G A A T C G A T G C C A G T A T C G A T G C G A C T
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGCACTAGCTGCT
--CAGCAGCTGN-
 A C T G A C T G T A G C G T C A T A G C A G C T C T G A A T C G A T G C C A G T A T C G A T G C G A C T
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGCACTAGCTGCT
--NNGCAGCTGTC
 A C T G A C T G T A G C G T C A T A G C A G C T C T G A A T C G A T G C C A G T A T C G A T G C G A C T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCACTAGCTGCT
--NNGCAGCTGTT
 A C T G A C T G T A G C G T C A T A G C A G C T C T G A A T C G A T G C C A G T A T C G A T G C G A C T
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGCACTAGCTGCT-
----CCAGCTGTTN
 A C T G A C T G T A G C G T C A T A G C A G C T C T G A A T C G A T G C C A G T A T C G A T G C G A C T A C G T
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCACTAGCTGCT
GGCTCYAKCAYC-
 A C T G A C T G T A G C G T C A T A G C A G C T C T G A A T C G A T G C C A G T A T C G A T G C G A C T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T

HES7/MA0822.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCACTAGCTGCT
TGGCACGTGCCA--
 A C G T A C T G A C T G T A G C G T C A T A G C A G C T C T G A A T C G A T G C C A G T A T C G A T G C G A C T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T A C G T