Information for 8-RKCTARSGAGAAGCMT (Motif 9)

C T A G A C T G A G T C C A G T C G T A C T A G A T C G A C T G C G T A C T A G C G T A C G T A C T A G T A G C G T A C G C A T
Reverse Opposite:
C G T A A C T G A C T G A G T C G A C T C G A T A G T C C G A T T A G C A T G C A G T C A C G T G T C A T A C G G T A C A G T C
p-value:1e-7
log p-value:-1.720e+01
Information Content per bp:1.622
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif101.9
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets52.0 +/- 19.4bp
Average Position of motif in Background53.4 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.52
Offset:1
Orientation:forward strand
Alignment:RKCTARSGAGAAGCMT
-TTGACCGAGAATTCC
 C T A G A C T G A G T C C A G T C G T A C T A G A T C G A C T G C G T A C T A G C G T A C G T A C T A G T A G C G T A C G C A T
A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:RKCTARSGAGAAGCMT
--------NGAAGC--
 C T A G A C T G A G T C C A G T C G T A C T A G A T C G A C T G C G T A C T A G C G T A C G T A C T A G T A G C G T A C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----RKCTARSGAGAAGCMT
ACTTAGTTAACTAAAAA---
 A C G T A C G T A C G T A C G T C T A G A C T G A G T C C A G T C G T A C T A G A T C G A C T G C G T A C T A G C G T A C G T A C T A G T A G C G T A C G C A T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A A C G T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:4
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----RKCTARSGAGAAGCMT
CCTTAGTTAACTAAAAT---
 A C G T A C G T A C G T A C G T C T A G A C T G A G T C C A G T C G T A C T A G A T C G A C T G C G T A C T A G C G T A C G T A C T A G T A G C G T A C G C A T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:RKCTARSGAGAAGCMT
-GNNACCGAGAATNNN
 C T A G A C T G A G T C C A G T C G T A C T A G A T C G A C T G C G T A C T A G C G T A C G T A C T A G T A G C G T A C G C A T
A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.46
Offset:2
Orientation:forward strand
Alignment:RKCTARSGAGAAGCMT
--GGAGGGGGAA----
 C T A G A C T G A G T C C A G T C G T A C T A G A T C G A C T G C G T A C T A G C G T A C G T A C T A G T A G C G T A C G C A T
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:7
Score:0.45
Offset:1
Orientation:reverse strand
Alignment:RKCTARSGAGAAGCMT
-TCTCGCGAGAAT---
 C T A G A C T G A G T C C A G T C G T A C T A G A T C G A C T G C G T A C T A G C G T A C G T A C T A G T A G C G T A C G C A T
A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T A C G T A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:8
Score:0.45
Offset:-3
Orientation:reverse strand
Alignment:---RKCTARSGAGAAGCMT
NAGNTCTCGCGAGAN----
 A C G T A C G T A C G T C T A G A C T G A G T C C A G T C G T A C T A G A T C G A C T G C G T A C T A G C G T A C G T A C T A G T A G C G T A C G C A T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.45
Offset:1
Orientation:reverse strand
Alignment:RKCTARSGAGAAGCMT
-GTTAACTAGN-----
 C T A G A C T G A G T C C A G T C G T A C T A G A T C G A C T G C G T A C T A G C G T A C G T A C T A G T A G C G T A C G C A T
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.45
Offset:-2
Orientation:reverse strand
Alignment:--RKCTARSGAGAAGCMT
GANGTTAACTAGTTTNN-
 A C G T A C G T C T A G A C T G A G T C C A G T C G T A C T A G A T C G A C T G C G T A C T A G C G T A C G T A C T A G T A G C G T A C G C A T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T