Information for 21-GTTAATACTA (Motif 42)

A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C
p-value:1e-3
log p-value:-7.313e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background54.0 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTTAATACTA--
TCTTTANTAATANN
 A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GTTAATACTA--
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTTAATACTA
-TTAATCCT-
 A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTAATACTA
-TTAATCCC-
 A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A
A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTTAATACTA
NYTAATCCYB
 A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTTAATACTA----
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTTAATACTA
-YTAATCCY-
 A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTAATACTA
CTTAATCCC-
 A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTAATACTA
CCTAATCCGC
 A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTAATACTA
TTTAAT----
 A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T