Information for 4-CTCAGGGAAYTKGCCK (Motif 4)

G A T C A G C T G A T C C T G A A C T G T A C G C A T G C G T A G T C A A G C T C G A T C A T G A T C G G T A C A T G C C A T G
Reverse Opposite:
G T A C T A C G A C T G A T G C G T A C C G T A T C G A A C G T C G A T G A T C A T G C A G T C A G C T C A T G C T G A C A T G
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.636
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif187.3
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets34.2 +/- 13.6bp
Average Position of motif in Background47.1 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCAGGGAAYTKGCCK
----GGGAATTTCC--
 G A T C A G C T G A T C C T G A A C T G T A C G C A T G C G T A G T C A A G C T C G A T C A T G A T C G G T A C A T G C C A T G
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGGGAAYTKGCCK
GCCTCAGGGCAT------
 A C G T A C G T G A T C A G C T G A T C C T G A A C T G T A C G C A T G C G T A G T C A A G C T C G A T C A T G A T C G G T A C A T G C C A T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCAGGGAAYTKGCCK
NACAGGAAAT------
 G A T C A G C T G A T C C T G A A C T G T A C G C A T G C G T A G T C A A G C T C G A T C A T G A T C G G T A C A T G C C A T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCAGGGAAYTKGCCK
SCCTSAGGSCAW------
 A C G T A C G T G A T C A G C T G A T C C T G A A C T G T A C G C A T G C G T A G T C A A G C T C G A T C A T G A T C G G T A C A T G C C A T G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTCAGGGAAYTKGCCK
---NGGGGATTTCCC-
 G A T C A G C T G A T C C T G A A C T G T A C G C A T G C G T A G T C A A G C T C G A T C A T G A T C G G T A C A T G C C A T G
A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

PH0009.1_Bsx/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCAGGGAAYTKGCCK
NTNAGNTAATTACCTN
 G A T C A G C T G A T C C T G A A C T G T A C G C A T G C G T A G T C A A G C T C G A T C A T G A T C G G T A C A T G C C A T G
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTCAGGGAAYTKGCCK
---AGGGGAATCCCCT
 G A T C A G C T G A T C C T G A A C T G T A C G C A T G C G T A G T C A A G C T C G A T C A T G A T C G G T A C A T G C C A T G
A C G T A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTCAGGGAAYTKGCCK
---AGGGGAATCCCCT
 G A T C A G C T G A T C C T G A A C T G T A C G C A T G C G T A G T C A A G C T C G A T C A T G A T C G G T A C A T G C C A T G
A C G T A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTCAGGGAAYTKGCCK
NACAGGAAAT------
 G A T C A G C T G A T C C T G A A C T G T A C G C A T G C G T A G T C A A G C T C G A T C A T G A T C G G T A C A T G C C A T G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTCAGGGAAYTKGCCK
HWWGTCAGCAWWTTT----
 A C G T A C G T A C G T G A T C A G C T G A T C C T G A A C T G T A C G C A T G C G T A G T C A A G C T C G A T C A T G A T C G G T A C A T G C C A T G
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T A C G T