Information for 23-TTTAATTCACCTT (Motif 33)

A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C G T C G T A C G T A C G T A
p-value:1e-3
log p-value:-8.006e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTAATTCACCTT
TTTAAT-------
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTAATTCACCTT
NNNTTTTAATTAANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PH0095.1_Lhx5/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTTAATTCACCTT
ANNATTTAATTAATTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0101.1_Lmx1b/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTTAATTCACCTT
AGTTTTTAATTAATTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTAATTCACCTT
ATATTAATTAA----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T A C G T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTAATTCACCTT
TTTAATTANN---
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C A C G T A C G T A C G T

LMX1A/MA0702.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTTAATTCACCTT
-TTAATTAA----
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A G C T G A C T G C T A C G T A C G A T G A C T C T G A T C G A A C G T A C G T A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTAATTCACCTT
NTTAATTGNN---
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C A C G T A C G T A C G T

PH0174.1_Vax1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTAATTCACCTT
CTNNGNTAATTAACNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T A C G T

PH0091.1_Lhx1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTAATTCACCTT
NNTTATTAATTAATNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G