Information for 2-DAAGDACAAAGTAAAC (Motif 2)

C G T A C T G A C T G A A C T G C A T G C G T A A G T C C G T A C G T A C G T A C T A G C G A T G T C A G T C A C G T A G T A C
Reverse Opposite:
A C T G A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C T G C G A T G A T C A G T C A G C T A G C T G A C T
p-value:1e-9
log p-value:-2.142e+01
Information Content per bp:1.758
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif35.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets66.5 +/- 29.1bp
Average Position of motif in Background50.2 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-DAAGDACAAAGTAAAC
CANAGNNCAAAGTCCA-
 A C G T C G T A C T G A C T G A A C T G C A T G C G T A A G T C C G T A C G T A C G T A C T A G C G A T G T C A G T C A C G T A G T A C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:DAAGDACAAAGTAAAC
AGAGTCCAAAGTCCA-
 C G T A C T G A C T G A A C T G C A T G C G T A A G T C C G T A C G T A C G T A C T A G C G A T G T C A G T C A C G T A G T A C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:DAAGDACAAAGTAAAC-
-GGGGTCAAAGTCCAAT
 C G T A C T G A C T G A A C T G C A T G C G T A A G T C C G T A C G T A C G T A C T A G C G A T G T C A G T C A C G T A G T A C A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-DAAGDACAAAGTAAAC
TATAGATCAAAGGAAAA
 A C G T C G T A C T G A C T G A A C T G C A T G C G T A A G T C C G T A C G T A C G T A C T A G C G A T G T C A G T C A C G T A G T A C
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:DAAGDACAAAGTAAAC
--GGAACAAAGR----
 C G T A C T G A C T G A A C T G C A T G C G T A A G T C C G T A C G T A C G T A C T A G C G A T G T C A G T C A C G T A G T A C
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-DAAGDACAAAGTAAAC
ATAAGAACAAAGGACTA
 A C G T C G T A C T G A C T G A A C T G C A T G C G T A A G T C C G T A C G T A C G T A C T A G C G A T G T C A G T C A C G T A G T A C
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:DAAGDACAAAGTAAAC
AAAGATCAAAGGAA--
 C G T A C T G A C T G A A C T G C A T G C G T A A G T C C G T A C G T A C G T A C T A G C G A T G T C A G T C A C G T A G T A C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:DAAGDACAAAGTAAAC
AAAGATCAAAGGGTT-
 C G T A C T G A C T G A A C T G C A T G C G T A A G T C C G T A C G T A C G T A C T A G C G A T G T C A G T C A C G T A G T A C
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-DAAGDACAAAGTAAAC
AGAAGAACAAAGGACTA
 A C G T C G T A C T G A C T G A A C T G C A T G C G T A A G T C C G T A C G T A C G T A C T A G C G A T G T C A G T C A C G T A G T A C
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-DAAGDACAAAGTAAAC
TATAGATCAAAGGAAAA
 A C G T C G T A C T G A C T G A A C T G C A T G C G T A A G T C C G T A C G T A C G T A C T A G C G A T G T C A G T C A C G T A G T A C
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A