Information for 9-AAGTTTAATATGGCAC (Motif 10)

C G T A C G T A C T A G C G A T C G A T A C G T G T C A C G T A A C G T C T G A A G C T A C T G A C T G A G T C C G T A A G T C
Reverse Opposite:
C T A G C G A T A C T G A G T C G T A C C T G A A G C T C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C G T
p-value:1e-7
log p-value:-1.677e+01
Information Content per bp:1.812
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.3 +/- 20.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAGTTTAATATGGCAC
---TTTAAT-------
 C G T A C G T A C T A G C G A T C G A T A C G T G T C A C G T A A C G T C T G A A G C T A C T G A C T G A G T C C G T A A G T C
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAGTTTAATATGGCAC
TATAATTATAATATTC---
 A C G T A C G T A C G T C G T A C G T A C T A G C G A T C G A T A C G T G T C A C G T A A C G T C T G A A G C T A C T G A C T G A G T C C G T A A G T C
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAGTTTAATATGGCAC
GCTAATTATAATTATC---
 A C G T A C G T A C G T C G T A C G T A C T A G C G A T C G A T A C G T G T C A C G T A A C G T C T G A A G C T A C T G A C T G A G T C C G T A A G T C
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C A C G T A C G T A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAGTTTAATATGGCAC
NNATNTGATANNNNN-
 C G T A C G T A C T A G C G A T C G A T A C G T G T C A C G T A A C G T C T G A A G C T A C T G A C T G A G T C C G T A A G T C
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAGTTTAATATGGCAC
TTTAATTATAATTAAG---
 A C G T A C G T A C G T C G T A C G T A C T A G C G A T C G A T A C G T G T C A C G T A A C G T C T G A A G C T A C T G A C T G A G T C C G T A A G T C
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAGTTTAATATGGCAC
NNTGTTTATTTTGGCA-
 A C G T C G T A C G T A C T A G C G A T C G A T A C G T G T C A C G T A A C G T C T G A A G C T A C T G A C T G A G T C C G T A A G T C
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAGTTTAATATGGCAC
-ATATTAATTAA----
 C G T A C G T A C T A G C G A T C G A T A C G T G T C A C G T A A C G T C T G A A G C T A C T G A C T G A G T C C G T A A G T C
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAGTTTAATATGGCAC
TAAGATTATAATACGG---
 A C G T A C G T A C G T C G T A C G T A C T A G C G A T C G A T A C G T G T C A C G T A A C G T C T G A A G C T A C T G A C T G A G T C C G T A A G T C
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAGTTTAATATGGCAC--
----CTAATATTGCTAAA
 C G T A C G T A C T A G C G A T C G A T A C G T G T C A C G T A A C G T C T G A A G C T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAGTTTAATATGGCAC--
----CTAATATTGCTAAA
 C G T A C G T A C T A G C G A T C G A T A C G T G T C A C G T A A C G T C T G A A G C T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A