Information for 1-CAGCTCCCGT (Motif 5)

A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C T A G G A C T
Reverse Opposite:
C T G A G A T C A C T G C T A G T C A G G C T A A T C G T G A C G A C T A C T G
p-value:1e-11
log p-value:-2.731e+01
Information Content per bp:1.827
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif224.2
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets53.2 +/- 23.5bp
Average Position of motif in Background52.7 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CAGCTCCCGT
--GCTCCG--
 A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C T A G G A C T
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGCTCCCGT
AGCAGCTGCTNN
 A C G T A C G T A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C T A G G A C T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTCCCGT
NNGCAGCTGTC--
 A C G T A C G T A C G T A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C T A G G A C T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAGCTCCCGT
NCAGCTGCTG-
 A C G T A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C T A G G A C T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGCTCCCGT-
TGCAGCTGTCCCT
 A C G T A C G T A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C T A G G A C T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTCCCGT--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C T A G G A C T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGCTCCCGT
AGCAGCTGCT--
 A C G T A C G T A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C T A G G A C T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAGCTCCCGT--
--GGTCCCGCCC
 A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C T A G G A C T A C G T A C G T
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTCCCGT----
TNNTGCTACTGTNNNN
 A C G T A C G T A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C T A G G A C T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTCCCGT----
CNNNGCTACTGTANNN
 A C G T A C G T A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C T A G G A C T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T