Information for 10-GTGGTCAGGG (Motif 20)

A C T G A C G T C T A G A C T G A C G T A T G C C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C G T A C A C G T A T C G C G T A A G T C G A T C C G T A A G T C
p-value:1e-6
log p-value:-1.611e+01
Information Content per bp:1.920
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif114.1
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets42.1 +/- 23.6bp
Average Position of motif in Background53.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTGGTCAGGG
AGRGGTCA---
 A C G T A C T G A C G T C T A G A C T G A C G T A T G C C G T A A C T G A C T G A C T G
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGTCAGGG--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G A C T G A C G T A T G C C G T A A C T G A C T G A C T G A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GTGGTCAGGG--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G A C T G A C G T A T G C C G T A A C T G A C T G A C T G A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGGTCAGGG----
GTTGCCATGGNAAC
 A C T G A C G T C T A G A C T G A C G T A T G C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGGTCAGGG---
-AGGTCAAGGTCA
 A C T G A C G T C T A G A C T G A C G T A T G C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGGTCAGGG---
-AGGTCAAGGTCA
 A C T G A C G T C T A G A C T G A C G T A T G C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTCAGGG
NNHTGTGGTTWN--
 A C G T A C G T A C G T A C G T A C T G A C G T C T A G A C T G A C G T A T G C C G T A A C T G A C T G A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTGGTCAGGG----
--TGTCAGGGGGCG
 A C T G A C G T C T A G A C T G A C G T A T G C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTCAGGG
CTGTGGTTTN--
 A C G T A C G T A C T G A C G T C T A G A C T G A C G T A T G C C G T A A C T G A C T G A C T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTGGTCAGGG
--AGTCACGC
 A C T G A C G T C T A G A C T G A C G T A T G C C G T A A C T G A C T G A C T G
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G