Information for 1-CACMVSKYCCTGA (Motif 2)

A G T C G T C A A T G C G T A C T C G A T A G C C A G T A G T C A T G C A G T C C G A T A T C G T G C A
Reverse Opposite:
A C G T A T G C G C T A A C T G A T C G T C A G G T C A A T C G A G C T A C T G A T C G A C G T A C T G
p-value:1e-13
log p-value:-3.107e+01
Information Content per bp:1.657
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.68%
Number of Background Sequences with motif765.6
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets51.4 +/- 26.9bp
Average Position of motif in Background49.1 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACMVSKYCCTGA
-ACCACATCCTGT
 A G T C G T C A A T G C G T A C T C G A T A G C C A G T A G T C A T G C A G T C C G A T A T C G T G C A
A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACMVSKYCCTGA-
TCGACCCCGCCCCTAT
 A C G T A C G T A G T C G T C A A T G C G T A C T C G A T A G C C A G T A G T C A T G C A G T C C G A T A T C G T G C A A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

Klf4/MA0039.2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CACMVSKYCCTGA
-GCCCCACCCA--
 A G T C G T C A A T G C G T A C T C G A T A G C C A G T A G T C A T G C A G T C C G A T A T C G T G C A
A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACMVSKYCCTGA-
NRGCCCCRCCCHBNN
 A C G T A G T C G T C A A T G C G T A C T C G A T A G C C A G T A G T C A T G C A G T C C G A T A T C G T G C A A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CACMVSKYCCTGA
--CCCCCCCC---
 A G T C G T C A A T G C G T A C T C G A T A G C C A G T A G T C A T G C A G T C C G A T A T C G T G C A
A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CACMVSKYCCTGA--
GCAGCCAAGCGTGACN
 A C G T A G T C G T C A A T G C G T A C T C G A T A G C C A G T A G T C A T G C A G T C C G A T A T C G T G C A A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

ESR2/MA0258.2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CACMVSKYCCTGA
AGGTCACCCTGACCT--
 A C G T A C G T A C G T A C G T A G T C G T C A A T G C G T A C T C G A T A G C C A G T A G T C A T G C A G T C C G A T A T C G T G C A
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CACMVSKYCCTGA-
--NNAYTTCCTGHN
 A G T C G T C A A T G C G T A C T C G A T A G C C A G T A G T C A T G C A G T C C G A T A T C G T G C A A C G T
A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CACMVSKYCCTGA-
SCAGYCADGCATGAC
 A C G T A G T C G T C A A T G C G T A C T C G A T A G C C A G T A G T C A T G C A G T C C G A T A T C G T G C A A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

POL002.1_INR/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CACMVSKYCCTGA
TCAGTCTT------
 A C G T A G T C G T C A A T G C G T A C T C G A T A G C C A G T A G T C A T G C A G T C C G A T A T C G T G C A
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T