Information for 1-GCCGYGGCTGCCATGT (Motif 1)

A C T G G A T C A T G C A C T G A G C T C T A G A C T G A G T C C A G T A C T G A G T C A G T C C G T A A C G T A C T G C A G T
Reverse Opposite:
G C T A G T A C T C G A A C G T A C T G A C T G A G T C G T C A A C T G A G T C A G T C T C G A G T A C A T C G C A T G A G T C
p-value:1e-14
log p-value:-3.337e+01
Information Content per bp:1.773
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.4 +/- 26.2bp
Average Position of motif in Background75.0 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GCCGYGGCTGCCATGT--
------GCCGCCATCTTG
 A C T G G A T C A T G C A C T G A G C T C T A G A C T G A G T C C A G T A C T G A G T C A G T C C G T A A C G T A C T G C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GCCGYGGCTGCCATGT--
------GCNGCCATCTTG
 A C T G G A T C A T G C A C T G A G C T C T A G A C T G A G T C C A G T A C T G A G T C A G T C C G T A A C G T A C T G C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCCGYGGCTGCCATGT
--CGCAGCTGCG----
 A C T G G A T C A T G C A C T G A G C T C T A G A C T G A G T C C A G T A C T G A G T C A G T C C G T A A C G T A C T G C A G T
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCCGYGGCTGCCATGT
ANTGCGGGGGCGGN-----
 A C G T A C G T A C G T A C T G G A T C A T G C A C T G A G C T C T A G A C T G A G T C C A G T A C T G A G T C A G T C C G T A A C G T A C T G C A G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCGYGGCTGCCATGT
AGATGCTRCTRCCHT--
 A C G T A C T G G A T C A T G C A C T G A G C T C T A G A C T G A G T C C A G T A C T G A G T C A G T C C G T A A C G T A C T G C A G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCCGYGGCTGCCATGT
-----GTCCGCCATTA
 A C T G G A T C A T G C A C T G A G C T C T A G A C T G A G T C C A G T A C T G A G T C A G T C C G T A A C G T A C T G C A G T
A C G T A C G T A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCCGYGGCTGCCATGT
GGNGCGNCTGTTNNN-
 A C T G G A T C A T G C A C T G A G C T C T A G A C T G A G T C C A G T A C T G A G T C A G T C C G T A A C G T A C T G C A G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCCGYGGCTGCCATGT
CAGGCCNNGGCCNN-----
 A C G T A C G T A C G T A C T G G A T C A T G C A C T G A G C T C T A G A C T G A G T C C A G T A C T G A G T C A G T C C G T A A C G T A C T G C A G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCCGYGGCTGCCATGT---
-----NGTTGCCATGGCAA
 A C T G G A T C A T G C A C T G A G C T C T A G A C T G A G T C C A G T A C T G A G T C A G T C C G T A A C G T A C T G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GCCGYGGCTGCCATGT
-------CTGCCCGCA
 A C T G G A T C A T G C A C T G A G C T C T A G A C T G A G T C C A G T A C T G A G T C A G T C C G T A A C G T A C T G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A