Information for 9-GGATGGCGCT (Motif 14)

A C T G A T C G G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G C T
Reverse Opposite:
C T G A C T A G G T A C C T A G G T A C A G T C G T C A C G A T A T G C T G A C
p-value:1e-4
log p-value:-9.411e+00
Information Content per bp:1.723
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif5.16%
Number of Background Sequences with motif423.3
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets38.4 +/- 22.8bp
Average Position of motif in Background48.1 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGATGGCGCT-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C T G A T C G G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGATGGCGCT-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C T G A T C G G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGATGGCGCT
GGTTGGCAT-
 A C T G A T C G G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G C T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GGATGGCGCT--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C T G A T C G G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G C T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGATGGCGCT
-NTTGGCANN
 A C T G A T C G G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G C T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGATGGCGCT---
-TTTGGCGCCAAA
 A C T G A T C G G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G C T A C G T A C G T A C G T
A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGATGGCGCT
--TTGGCA--
 A C T G A T C G G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G C T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGATGGCGCT-
TAATGGCGGNC
 A C T G A T C G G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G C T A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGATGGCGCT-----
AGATGCTRCTRCCHT
 A C T G A T C G G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGATGGCGCT--
----GGCGCGCT
 A C T G A T C G G C T A C A G T A C T G A C T G A G T C C A T G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T