Information for 5-AGAGAGAGAGAGAGAG (Motif 12)

C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A C T A G C G T A C T A G C T G A C T A G
Reverse Opposite:
A G T C A G C T A G T C G C A T A G T C A G C T A G T C A G C T A G T C A G C T A T G C A G C T A T G C A G C T A T G C A G C T
p-value:1e-6
log p-value:-1.465e+01
Information Content per bp:1.715
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif7.10%
Number of Background Sequences with motif464.9
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets36.2 +/- 22.9bp
Average Position of motif in Background52.8 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGAGAGAGAGAGAGAG---
----AGAAAGTGAAAGTGA
 C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A C T A G C G T A C T A G C T G A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGAGAGAGAGAGAGAG-
-----GAAAGTGAAAGT
 C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A C T A G C G T A C T A G C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGAGAGAGAGAGAGAG
-BAGTCATANTGAAAG
 C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A C T A G C G T A C T A G C T G A C T A G
A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

IRF1/MA0050.2/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGAGAGAGAGAGAGAG-----
AAANNGAAAGTGAAAGTAAAN
 C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A C T A G C G T A C T A G C T G A C T A G A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGAGAGAGAGAGAGAG
-NNNACCGAGAGTNNN
 C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A C T A G C G T A C T A G C T G A C T A G
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGAGAGAGAGAGAGAG--
WNAGTCADAVTGAAACTN
 C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A C T A G C G T A C T A G C T G A C T A G A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AGAGAGAGAGAGAGAG----
-----TTGACCGAGAATTCC
 C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A C T A G C G T A C T A G C T G A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

ZNF263/MA0528.1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---AGAGAGAGAGAGAGAG--
GGAGGAGGAGGGGGAGGAGGA
 A C G T A C G T A C G T C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A C T A G C G T A C T A G C T G A C T A G A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:AGAGAGAGAGAGAGAG
-----GGGCGGGAAGG
 C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A C T A G C G T A C T A G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:AGAGAGAGAGAGAGAG-
-----GAAAGTGAAAGT
 C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G C T G A C T A G C G T A C T A G C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T