Information for 1-GTTGWCAGCTCCCTTA (Motif 4)

A C T G A G C T C G A T T C A G C G T A T G A C G T C A A C T G A G T C C G A T A G T C A G T C G T A C A C G T A G C T T C G A
Reverse Opposite:
A G C T C T G A C G T A A C T G C T A G T C A G C G T A A C T G A G T C A C G T A C T G G C A T A G T C C G T A C T G A G T A C
p-value:1e-13
log p-value:-3.079e+01
Information Content per bp:1.784
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 25.1bp
Average Position of motif in Background73.3 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTTGWCAGCTCCCTTA
GGATTGACAGGTCNTT--
 A C G T A C G T A C T G A G C T C G A T T C A G C G T A T G A C G T C A A C T G A G T C C G A T A G T C A G T C G T A C A C G T A G C T T C G A
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTTGWCAGCTCCCTTA
NTATTGACAGCTNNTT--
 A C G T A C G T A C T G A G C T C G A T T C A G C G T A T G A C G T C A A C T G A G T C C G A T A G T C A G T C G T A C A C G T A G C T T C G A
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTTGWCAGCTCCCTTA
GTATTGACAGCTNNTT--
 A C G T A C G T A C T G A G C T C G A T T C A G C G T A T G A C G T C A A C T G A G T C C G A T A G T C A G T C G T A C A C G T A G C T T C G A
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTGWCAGCTCCCTTA
SCTGTCARCACC----
 A C T G A G C T C G A T T C A G C G T A T G A C G T C A A C T G A G T C C G A T A G T C A G T C G T A C A C G T A G C T T C G A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GTTGWCAGCTCCCTTA
-------GCTCCG---
 A C T G A G C T C G A T T C A G C G T A T G A C G T C A A C T G A G T C C G A T A G T C A G T C G T A C A C G T A G C T T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTTGWCAGCTCCCTTA
GATATTGACAGCTGCGT--
 A C G T A C G T A C G T A C T G A G C T C G A T T C A G C G T A T G A C G T C A A C T G A G T C C G A T A G T C A G T C G T A C A C G T A G C T T C G A
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTGWCAGCTCCCTTA
NNATTGACAGGTGCTT--
 A C G T A C G T A C T G A G C T C G A T T C A G C G T A T G A C G T C A A C T G A G T C C G A T A G T C A G T C G T A C A C G T A G C T T C G A
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTGWCAGCTCCCTTA
-TTGACAGC-------
 A C T G A G C T C G A T T C A G C G T A T G A C G T C A A C T G A G T C C G A T A G T C A G T C G T A C A C G T A G C T T C G A
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTTGWCAGCTCCCTTA
VBTGWCAGCB------
 A C T G A G C T C G A T T C A G C G T A T G A C G T C A A C T G A G T C C G A T A G T C A G T C G T A C A C G T A G C T T C G A
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTTGWCAGCTCCCTTA
NTATTGACAGGTNNTN--
 A C G T A C G T A C T G A G C T C G A T T C A G C G T A T G A C G T C A A C T G A G T C C G A T A G T C A G T C G T A C A C G T A G C T T C G A
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T A C G T A C G T