Information for 3-MACATGGCGCMTA (Motif 3)

G T C A C G T A G T A C C G T A A C G T A C T G A C T G A G T C A C T G A T G C G T A C A G C T G C T A
Reverse Opposite:
C G A T C T G A A C T G T A C G A G T C C T A G A G T C A G T C C G T A A C G T A C T G A C G T A C G T
p-value:1e-14
log p-value:-3.413e+01
Information Content per bp:1.812
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 25.9bp
Average Position of motif in Background66.8 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-MACATGGCGCMTA
CAAGATGGCGGC--
 A C G T G T C A C G T A G T A C C G T A A C G T A C T G A C T G A G T C A C T G A T G C G T A C A G C T G C T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-MACATGGCGCMTA
CAAGATGGCGGC--
 A C G T G T C A C G T A G T A C C G T A A C G T A C T G A C T G A G T C A C T G A T G C G T A C A G C T G C T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:MACATGGCGCMTA
-TAATGGCGGNC-
 G T C A C G T A G T A C C G T A A C G T A C T G A C T G A G T C A C T G A T G C G T A C A G C T G C T A
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:MACATGGCGCMTA---
AAAATGGCGCCATTTT
 G T C A C G T A G T A C C G T A A C G T A C T G A C T G A G T C A C T G A T G C G T A C A G C T G C T A A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

Myc/MA0147.2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---MACATGGCGCMTA
AAGCACATGG------
 A C G T A C G T A C G T G T C A C G T A G T A C C G T A A C G T A C T G A C T G A G T C A C T G A T G C G T A C A G C T G C T A
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-MACATGGCGCMTA----
AAAAATGGCGCCATTTTT
 A C G T G T C A C G T A G T A C C G T A A C G T A C T G A C T G A G T C A C T G A T G C G T A C A G C T G C T A A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--MACATGGCGCMTA
GTCACGTGGM-----
 A C G T A C G T G T C A C G T A G T A C C G T A A C G T A C T G A C T G A G T C A C T G A T G C G T A C A G C T G C T A
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---MACATGGCGCMTA
GGTCACATGAC-----
 A C G T A C G T A C G T G T C A C G T A G T A C C G T A A C G T A C T G A C T G A G T C A C T G A T G C G T A C A G C T G C T A
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-MACATGGCGCMTA---
NNNNTTGGCGCCGANNN
 A C G T G T C A C G T A G T A C C G T A A C G T A C T G A C T G A G T C A C T G A T G C G T A C A G C T G C T A A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:MACATGGCGCMTA-
--TTTGGCGCCAAA
 G T C A C G T A G T A C C G T A A C G T A C T G A C T G A G T C A C T G A T G C G T A C A G C T G C T A A C G T
A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A