Information for 5-CCAGGCCACSTGCCCA (Motif 17)

A G T C A G T C C G T A A C T G C T A G A G T C A G T C G T C A A G T C A T G C A C G T A C T G A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C T G A G T C G T C A T A C G C T A G A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.890
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 25.9bp
Average Position of motif in Background51.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCAGGCCACSTGCCCA
---SNGCACCTGCHS-
 A G T C A G T C C G T A A C T G C T A G A G T C A G T C G T C A A G T C A T G C A C G T A C T G A G T C A G T C A G T C C G T A
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCAGGCCACSTGCCCA
----ACCACGTGCTC-
 A G T C A G T C C G T A A C T G C T A G A G T C A G T C G T C A A G T C A T G C A C G T A C T G A G T C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCAGGCCACSTGCCCA
----GCCACGTG----
 A G T C A G T C C G T A A C T G C T A G A G T C A G T C G T C A A G T C A T G C A C G T A C T G A G T C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCAGGCCACSTGCCCA
CCNNANCACGTGGTCN
 A G T C A G T C C G T A A C T G C T A G A G T C A G T C G T C A A G T C A T G C A C G T A C T G A G T C A G T C A G T C C G T A
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

HEY1/MA0823.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCAGGCCACSTGCCCA
----GACACGTGCC--
 A G T C A G T C C G T A A C T G C T A G A G T C A G T C G T C A A G T C A T G C A C G T A C T G A G T C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.57
Offset:9
Orientation:forward strand
Alignment:CCAGGCCACSTGCCCA--
---------ATGCCCACC
 A G T C A G T C C G T A A C T G C T A G A G T C A G T C G T C A A G T C A T G C A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCAGGCCACSTGCCCA
CTTGGCANNNTGCCAA
 A G T C A G T C C G T A A C T G C T A G A G T C A G T C G T C A A G T C A T G C A C G T A C T G A G T C A G T C A G T C C G T A
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCAGGCCACSTGCCCA
-----CCACGTGGNN-
 A G T C A G T C C G T A A C T G C T A G A G T C A G T C G T C A A G T C A T G C A C G T A C T G A G T C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T

USF1/MA0093.2/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCAGGCCACSTGCCCA
----GCCACGTGACC-
 A G T C A G T C C G T A A C T G C T A G A G T C A G T C G T C A A G T C A T G C A C G T A C T G A G T C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCAGGCCACSTGCCCA
-----CCACGTGGNN-
 A G T C A G T C C G T A A C T G C T A G A G T C A G T C G T C A A G T C A T G C A C G T A C T G A G T C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T