Information for 6-CTCCAGCCCG (Motif 13)

A T G C G A C T A G T C A G T C C G T A A C T G A G T C A G T C G A T C C A T G
Reverse Opposite:
G T A C C T A G T C A G C T A G T G A C A C G T T C A G A C T G C T G A A T C G
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.825
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.87%
Number of Background Sequences with motif532.8
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets48.4 +/- 27.3bp
Average Position of motif in Background50.8 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAGCCCG
NCTTCCCGCCC-
 A C G T A C G T A T G C G A C T A G T C A G T C C G T A A C T G A G T C A G T C G A T C C A T G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTCCAGCCCG
GGTCCCGCCC-
 A C G T A T G C G A C T A G T C A G T C C G T A A C T G A G T C A G T C G A T C C A T G
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAGCCCG
NNTTCCCGCCC-
 A C G T A C G T A T G C G A C T A G T C A G T C C G T A A C T G A G T C A G T C G A T C C A T G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAGCCCG
GGCTCYAKCAYC
 A C G T A C G T A T G C G A C T A G T C A G T C C G T A A C T G A G T C A G T C G A T C C A T G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTCCAGCCCG
---CAGCC--
 A T G C G A C T A G T C A G T C C G T A A C T G A G T C A G T C G A T C C A T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAGCCCG
NYTTCCCGCC--
 A C G T A C G T A T G C G A C T A G T C A G T C C G T A A C T G A G T C A G T C G A T C C A T G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCCAGCCCG
TTCCCGCCWG
 A T G C G A C T A G T C A G T C C G T A A C T G A G T C A G T C G A T C C A T G
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCCAGCCCG-
TTTCCCGCCMAV
 A C G T A T G C G A C T A G T C A G T C C G T A A C T G A G T C A G T C G A T C C A T G A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCCAGCCCG
--CCAGACAG
 A T G C G A C T A G T C A G T C C G T A A C T G A G T C A G T C G A T C C A T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTCCAGCCCG--
NRGCCCCRCCCHBNN
 A C G T A C G T A C G T A T G C G A C T A G T C A G T C C G T A A C T G A G T C A G T C G A T C C A T G A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C