Information for 3-AAAACCHGTCCTGTCA (Motif 9)

G C T A G T C A T C G A C T G A G A T C G T A C G T A C A T C G C A G T A G T C G T A C A C G T A C T G A C G T G T A C T G C A
Reverse Opposite:
A C G T A C T G G T C A G T A C G T C A A C T G A C T G G C T A A T G C C A G T A C T G C T A G A G C T A C G T A C G T C A G T
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.721
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.4 +/- 20.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.63
Offset:9
Orientation:reverse strand
Alignment:AAAACCHGTCCTGTCA-
---------CCTGTCAA
 G C T A G T C A T C G A C T G A G A T C G T A C G T A C A T C G C A G T A G T C G T A C A C G T A C T G A C G T G T A C T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:AAAACCHGTCCTGTCA-
---------GCTGTCAA
 G C T A G T C A T C G A C T G A G A T C G T A C G T A C A T C G C A G T A G T C G T A C A C G T A C T G A C G T G T A C T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.60
Offset:10
Orientation:reverse strand
Alignment:AAAACCHGTCCTGTCA-
----------NTGTCAN
 G C T A G T C A T C G A C T G A G A T C G T A C G T A C A T C G C A G T A G T C G T A C A C G T A C T G A C G T G T A C T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AAAACCHGTCCTGTCA----
----AAGCACCTGTCAATAT
 G C T A G T C A T C G A C T G A G A T C G T A C G T A C A T C G C A G T A G T C G T A C A C G T A C T G A C G T G T A C T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAAACCHGTCCTGTCA----
----AAAGACCTGTCAATCC
 G C T A G T C A T C G A C T G A G A T C G T A C G T A C A T C G C A G T A G T C G T A C A C G T A C T G A C G T G T A C T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AAAACCHGTCCTGTCA----
----AAAGACCTGTCAATAC
 G C T A G T C A T C G A C T G A G A T C G T A C G T A C A T C G C A G T A G T C G T A C A C G T A C T G A C G T G T A C T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AAAACCHGTCCTGTCA----
----AATTACCTGTCAATAC
 G C T A G T C A T C G A C T G A G A T C G T A C G T A C A T C G C A G T A G T C G T A C A C G T A C T G A C G T G T A C T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:AAAACCHGTCCTGTCA-----
---------SCTGTCARCACC
 G C T A G T C A T C G A C T G A G A T C G T A C G T A C A T C G C A G T A G T C G T A C A C G T A C T G A C G T G T A C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.54
Offset:8
Orientation:forward strand
Alignment:AAAACCHGTCCTGTCA--
--------VGCTGWCAVB
 G C T A G T C A T C G A C T G A G A T C G T A C G T A C A T C G C A G T A G T C G T A C A C G T A C T G A C G T G T A C T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AAAACCHGTCCTGTCA-----
----NNNCAGCTGTCAATATN
 G C T A G T C A T C G A C T G A G A T C G T A C G T A C A T C G C A G T A G T C G T A C A C G T A C T G A C G T G T A C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C